Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02063 ATGATGATATCAGCTTCCATGTCTTCTCTAACGAGGAGTTCGCTGGAGGAGATGCTTGAATCGCTTCGCCGGAGAGACGAGGAGGAGAAGCCGAAGGACTTGCCGCCGGCATTGCCGTCGCGGCCGCCGTCGAGGGCGCGGTTGCCGCCGGGGAGGAGGTCGCTGCCTAACAACTTCAAGGTGGATGGTGAGAATGGTGTGATGGGGCACAGAAGGAAGGGCAGTTTTGGGACCAAGAAGGTCAAGTTGAATGTTGAATCCCCTTATGAAGTCAAATCAGAAGAGATAGTGAGTGAACAATCATCACCACGTCCGGTTTTTACATCCAATGATGCTTCTGCTGAGTGTGAAGCTCCTCCTCCGACCGGGGAATTGGAGGATGATAATGTTGTTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCGAAAGGGAAGTGGGAGCTGGGAACAATACAGTCAACTTCAGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAACGTTATCAAAGTAGCCAGATCAGAGCTGTTACCGGCCAATCCTGATATTTTAGAGGGTGTTGAAGATCTTATACAGCTCAGTTATTTAAATGAGCCCTCAGTTCTGCACAATCTTCAGTCTAGATATTCTCAGGATATGATTTACAGTAAATCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATGTTCAAATTTATGGAGATGATTATATTTCAGCTTATAGGCAGAAACTTATGGATAGGCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATGAGAGATGAAGCGAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCTGTTCTGGAATAGAAAATGAAGTTCTCCTGACAAACTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTGTAAGACTTCAAGAGTTGTTCAACTTGCCTTGGACGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAAAGACTGAATCTTAGGGCGGCTAGCGAATATAAATATCTTAACCAGAGTGACTGCATGACAATTGATGGTGTTGATGATGCTAAAAAGTTTCATAGGCTGATGAAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTAGTTTTTAAGATGCTGACTGCAATATTATGGTTGGGAAATATATCATTCCAAGATACTGACAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACAAATGCTGCTTTGCTAATGGGTTGCAGTTCCCATGAGCTAATGGAAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACCATTACCAAGACATTGACCTTGCGGCAGGCAATTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGGTTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTGGGTAAACGCCGCACTGGGAGATCCATAAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGATTACGAATTAGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGTGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGACGAGGAATCGAATTTCCCCAGGGCCAGTGATCTAACACTTGCCAACAAACTTAAACAGCACCTGCACGCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTAGTGTCTGTCATTATGCAGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAACAGAGATCCACTACCATCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTGCTACAGTTGTTCACAAAGACGCTTAATCAGTCTCAGAAGCAATCAAATTCCTTGTATGGAGGTTCTCTGGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGACCACCACACCTCACTTCATTCGCTGTATAAAGCCAAATACTAAGCAACAACCTGGAGTATATGATGAAGATCTTGTGCTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAATGACGCATCAAGAGTTTTCCAGAAGGTACGGGTTTCTGCTTTCTGAGGCAAACACATCTCAGGATTCATTGAGCATTTCAGTTGCTGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGATTGGGGCACTGGAGGATAGGAGAAAACATCTTTTGCAGGGAATACTTGGGATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGTCGTCATTACCATGAACTTAAGAATGGAGTGACTATTTTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTATGACTATTTCTACTGAAAATATTAAGGAGATAGAGGCAGCCACAACACTACAATCTGTAATTCGTGGCTGGCTGGTTCGGAGGCATGCTAGTAGCTTGAATAAGTCAAAGAAATCTCCTGGAAATGCAAGATCTAGGCGAAGGTCACGTGTGAAGATGCCTGAAGTAAAGGATGTGTCCGGTGAGCGGGGCCAGAATCTTCCTTCAGCCTTAGCAGAACTCCAAAGGCGGGTTATCAAGGCTGAAGCTACCATAGAGCAAAAGGAAGAGGAAAATGCCGAATTGAAGGAACAGCTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGAAAAGGATGAAATCAATGGAGGATATGTGGCAAAAACAGATGGCATCTTTGCAAATGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAGCAGTCAAATTGCGAGGCGTGATGTTGCGTCACCTTTCGGCTATGATTCAGAAGATGCTACTTCTGTGGGATCCCGAACACCTCGAACACCTGGGGCAAGCACACCTTTGAAGTATTCCAGTAGTCTTACTGAAGCTGGAGCAGGGAGAGATGCCAAAGGTACTTTGACTTCAGTCAGCAACCTGATGAAGGAATTTGAGCAACGCAGACATACCTTTGATGATGATGCCAGAGCTCTGGTTGAGGTTAAAACGGGTCAATCTGCTAACACGAATTCCGTTGAAGAACTTCGGAAACTCAAACATAGCTTTGAGGGGTGGAAGAAAGAATACAAGGCTAGACTAAGAGAGACAAAAGCAAGACTACATAAATCAGAAATGGATAAAAGTCGGCGGAGGTGGTGGGGGAAATTGAGTTCGAGAGCACTATAA 3585 0.4268 MMISASMSSLTRSSLEEMLESLRRRDEEEKPKDLPPALPSRPPSRARLPPGRRSLPNNFKVDGENGVMGHRRKGSFGTKKVKLNVESPYEVKSEEIVSEQSSPRPVFTSNDASAECEAPPPTGELEDDNVVYFIKKKLHVWCRQPKGKWELGTIQSTSGEEASVSLSNGNVIKVARSELLPANPDILEGVEDLIQLSYLNEPSVLHNLQSRYSQDMIYSKSGPILIALNPFKDVQIYGDDYISAYRQKLMDRPHVYAMADAAYNEMMRDEANQSIIISGESGSGKTETAKIAMQYLAALGGGCSGIENEVLLTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTMGKICGAKIQTCKTSRVVQLALDERSYHIFYQLCAGSSSDLKERLNLRAASEYKYLNQSDCMTIDGVDDAKKFHRLMKALDVIRMCKEDQELVFKMLTAILWLGNISFQDTDNENHIEVVNDEAVTNAALLMGCSSHELMEALSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYASLFGWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPLGLLSLLDEESNFPRASDLTLANKLKQHLHANPCFKGERGRAFSVCHYAGEVLYDTSGFLEKNRDPLPSDSIQLLSSCSCELLQLFTKTLNQSQKQSNSLYGGSLDSQKQSVGTKFKGQLFKLMHQLETTTPHFIRCIKPNTKQQPGVYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLSEANTSQDSLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKHLLQGILGIQKSFRGYQARRHYHELKNGVTILQSFVRGEIARREYGVMVKSSMTISTENIKEIEAATTLQSVIRGWLVRRHASSLNKSKKSPGNARSRRRSRVKMPEVKDVSGERGQNLPSALAELQRRVIKAEATIEQKEEENAELKEQLKQFERRWIEYEKRMKSMEDMWQKQMASLQMSLAAARKSLASENASSQIARRDVASPFGYDSEDATSVGSRTPRTPGASTPLKYSSSLTEAGAGRDAKGTLTSVSNLMKEFEQRRHTFDDDARALVEVKTGQSANTNSVEELRKLKHSFEGWKKEYKARLRETKARLHKSEMDKSRRRWWGKLSSRAL 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02063 1194 ProSiteProfiles IQ motif profile. 881 910 IPR000048 GO:0005515
Gma12g02063 1194 PANTHER MYOSIN 120 1192 - -
Gma12g02063 1194 ProSiteProfiles IQ motif profile. 858 886 IPR000048 GO:0005515
Gma12g02063 1194 CDD MYSc_Myo8 202 844 IPR036022 -
Gma12g02063 1194 SMART iq_5 917 939 IPR000048 GO:0005515
Gma12g02063 1194 SMART iq_5 880 902 IPR000048 GO:0005515
Gma12g02063 1194 SMART iq_5 857 879 IPR000048 GO:0005515
Gma12g02063 1194 Gene3D - 369 425 - -
Gma12g02063 1194 Gene3D Kinesin motor domain 187 789 IPR036961 -
Gma12g02063 1194 Gene3D - 790 857 - -
Gma12g02063 1194 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 906 IPR027417 -
Gma12g02063 1194 Gene3D - 862 908 - -
Gma12g02063 1194 Gene3D Myosin VI head, motor domain, U50 subdomain 426 534 - -
Gma12g02063 1194 MobiDBLite consensus disorder prediction 1066 1103 - -
Gma12g02063 1194 Pfam Myosin head (motor domain) 190 844 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 MobiDBLite consensus disorder prediction 940 973 - -
Gma12g02063 1194 Coils Coil 1159 1179 - -
Gma12g02063 1194 Pfam IQ calmodulin-binding motif 885 901 IPR000048 GO:0005515
Gma12g02063 1194 Pfam IQ calmodulin-binding motif 862 879 IPR000048 GO:0005515
Gma12g02063 1194 Pfam IQ calmodulin-binding motif 920 937 IPR000048 GO:0005515
Gma12g02063 1194 Coils Coil 979 1027 - -
Gma12g02063 1194 MobiDBLite consensus disorder prediction 94 109 - -
Gma12g02063 1194 MobiDBLite consensus disorder prediction 1 16 - -
Gma12g02063 1194 MobiDBLite consensus disorder prediction 1 70 - -
Gma12g02063 1194 SMART MYSc_2a 182 857 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 MobiDBLite consensus disorder prediction 17 35 - -
Gma12g02063 1194 MobiDBLite consensus disorder prediction 94 122 - -
Gma12g02063 1194 PANTHER MYOSIN-2 ISOFORM X1 120 1192 - -
Gma12g02063 1194 ProSiteProfiles Myosin motor domain profile. 188 856 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 ProSiteProfiles IQ motif profile. 918 947 IPR000048 GO:0005515
Gma12g02063 1194 Gene3D - 557 746 - -
Gma12g02063 1194 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 PRINTS Myosin heavy chain signature 545 573 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 PRINTS Myosin heavy chain signature 598 626 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g02063 1194 MobiDBLite consensus disorder prediction 1069 1093 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02063 Gma-Chr12 41352095 41362664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02063 1 1188 Myosins gene family AT5G54280 62.338 0.0 1545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02063 K10357 - gmx:100801876 2261.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02063 12 41352095 41362664 Gma12g02063 12 41352095 41362664 ECH