Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02061 ATGGCCACCTCTGACCACCCTGTCCAGGAATCACGTTTCTCACGCATGCACTACTTCTCCACTgacgacgaccaagacgaggatgacgacgacaccgacctcgacttcgtcgacgacagcaatgTCAGCCCTGCTGAAGAGGAGGAACCCAAAAAATCCGACATTCTCGGCGGCGAGAATTTCAATCGCCGCAGGGAATTTCGGGTGGTGCTGGACCCGCGAGGCAAGTGGGTTCAGGAATGGAACAGGGTGTTCCTCCTCGTGTGCGCCACCGGGTTGTTCGTGGACCCGCTGTTCTTCTACGCGCTGTCGATAAGCGACACGTGTATGTGCCTCTTCGTGGATGGGTGGCTCGTCATCACCGTCACTGCGCTCCGCTGCATGACGGACGCGTTGCACGTGTGGAACATGTGGTTGGAGTTCAAGATGGCGAAACGTTCTTCTTCTTTTATCGGAAGGGACACTAACGCCTCAGGTGGCGGCGGCGGAGGCGGAGGCGGCTATGCTCTTCGCTACCTCAAGGCCAAACGGGGCTTCTTCTTTGACCTCTTTGTCATCCTCCCTATTCCCCAGATTGTGCTATGGGTGACAATTCCGTTCTTGTTGAAGAAAGGATCAATTACGTTGGTGGTGACAGTGTTCTTAATTATGTTCCTCTTTCAATACCTTCCCAAAATTTATCACTCTGTTTGCCTCTTGCGTCGCATGCAAGACCTTTCTGGCTACATTTCTGGCACCGTTTGGTGGGGTATCGCACTCAACCTGATCGCATATTTTGTTGCTTCCCATGCTGCAGGGGCATGTTGGTACTTGCTAGGGTTACAAAGAGCAGCAAAGTGCCTAGAAGAGCAATGTGCAAAAACAACTGGTTGTGGATTGAGAACACTGTGTTGCAAAGAGCCTATATACTATGGAGGCATTAACATTGTAAGAGACAAAACAAGGTTGTTATGGGCACAGAACAGGGAAGCTAGGTCTACTTGCTTGGACAGTGCTGATAACTACGACTATGGTGTATATGAATGGTCTGTACAACTCGTCACAAATGATAGCCGATTGGAAAAGATACTTTTCCCTATCTTCTGGGGCCTAATGACTCTAAGCACTTTTGGGAACCTAGAGAGCACACCAGAGCGACTAGAAGTGATTTTTAACATTATTGTGTTGACTAGTGGCCTCCTTCTGGTGACTATGCTGATTGGCAACATCAAGGTGTTTTTGCATTCCACAACATCAAAGAAGCAAGCGATGCTATTGAGGATGAGGAACATTGAATGGTGGATGAGCAAAAGGCGATTGCCACAAGGGTTCCGGCAGCGCGTGAGGAACTATGAGCGGATGCGTTGGGCTGCCACGCGCGGGGTTGATGAATGCCAGATGATTAAAAATCTCCCTGAGGGACTAAGAAGGGACATCAAGTACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCACTCTTTCAGCATATGGATGATTTGGTGCTAGAGAATATTTGTGACCGTGTGAAGTCCCTTGTATTCACTAAGGGAGAAACAATAACGAAAGAAGGAGACCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGTCACCTTCAAAGTAGCCAAGTACTCCGAGACGGAGTGAAGAGTTTCTGCATGTTAGGGCCGGGGAACTTCAGTGGAGACGAGCTGCTCTCATGGTGTCTGAGAAGGCCATTCATAGAGCGTCTTCCACCGTCTTCATGCACGTTGGTGACACTGGAAACGACAGAGGCGTTTGGGCTTGAGGCACAGGACGTGAAGTACGTGACGCAACATTTCAGGTACACATTCGTGAATGAGAAGGTGAAGAGGAGTGCCAGGTATTACTCGCCAGCTTGGAGAACTTGGGCTGCGGTGGCCATTCAGTTGGCTTGGAGGAGGTACCAGCATCGTTTGACTTTGACTTCTTTGTCCTTTATAAGGCCCCGCAGGCCTCTCTCTAGGTCTACTTCCATGGAAGAGGATAGGCTTCGTTTATATACGGCTATGTTAACCTCCCCCAAGCCTAATCAAGATGACTTTGACTTCTGA 2052 0.4771 MATSDHPVQESRFSRMHYFSTDDDQDEDDDDTDLDFVDDSNVSPAEEEEPKKSDILGGENFNRRREFRVVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWLVITVTALRCMTDALHVWNMWLEFKMAKRSSSFIGRDTNASGGGGGGGGGYALRYLKAKRGFFFDLFVILPIPQIVLWVTIPFLLKKGSITLVVTVFLIMFLFQYLPKIYHSVCLLRRMQDLSGYISGTVWWGIALNLIAYFVASHAAGACWYLLGLQRAAKCLEEQCAKTTGCGLRTLCCKEPIYYGGINIVRDKTRLLWAQNREARSTCLDSADNYDYGVYEWSVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTPERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHSTTSKKQAMLLRMRNIEWWMSKRRLPQGFRQRVRNYERMRWAATRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITKEGDPVQRMLFVVRGHLQSSQVLRDGVKSFCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPAWRTWAAVAIQLAWRRYQHRLTLTSLSFIRPRRPLSRSTSMEEDRLRLYTAMLTSPKPNQDDFDF 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02061 683 MobiDBLite consensus disorder prediction 1 57 - -
Gma12g02061 683 Gene3D Helix hairpin bin 411 477 - -
Gma12g02061 683 MobiDBLite consensus disorder prediction 23 43 - -
Gma12g02061 683 CDD CAP_ED 486 592 IPR000595 -
Gma12g02061 683 Pfam Cyclic nucleotide-binding domain 506 594 IPR000595 -
Gma12g02061 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 680 - -
Gma12g02061 683 SUPERFAMILY Voltage-gated potassium channels 72 406 - -
Gma12g02061 683 SMART cnmp_10 486 615 IPR000595 -
Gma12g02061 683 Gene3D Jelly Rolls 484 602 IPR014710 -
Gma12g02061 683 SUPERFAMILY cAMP-binding domain-like 412 600 IPR018490 -
Gma12g02061 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 2 680 - -
Gma12g02061 683 Pfam Ion transport protein 81 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma12g02061 683 ProSiteProfiles cAMP/cGMP binding motif profile. 486 565 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02061 Gma-Chr12 41306291 41315704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02061 57 682 Ion Channels AT5G54250 78.060 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02061 K05391 - gmx:100800795 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02061 12 41306291 41315704 Gma12g02061 12 41306291 41315704 ECH