Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02053 ATGGCCTCTGATCAGCACAACACGTTCCATGAGGAAGGAGGTGGCAAATCAGCATGTTCCAGGAGCAGAAAGGGTCCAAAGAAGCCACCCCAGAGAGGTTTAGGCGTGGCTCAGTTAGAAAGGTTGAGGCTTCAAGAGTCTTGGAAGAAGATGAATGAAGGGTCTTCTTCTGGAGGAGGAGTGCTACAAGTACCACTACCAACCCTCCATGATCACCACCATCATCAACAACAACAACTTTTTCAGTGCCACCCTCCTCCAGTGTTTGCAGCAAGTGGTGGTGTTCCTATGAGGTATGGTGCACCATCACCAAACCTTGGCTTTCAGTACTTTCAGCATCTTCAACAACATGTGATCAATGGCCACAACAACACTATTGGTGGAGATTGTATGCTTCCTTCATTTGGATCTGGGCCTCCACTTTTGGTTGGAACCCCTCTTGAGACCTCAAAAGAGCTCTCTTCAATTCCAAATCTTCATTCTCAGCCTGAGTGTTTTGATTTTTGCCTCAAGAAAACACGTTTCAATGAGTACAATGAAAAGGGATCATCAAATGAAAGGGGAGAGAGGGCTTTGGAGATAGGGCCCAATGGCAATGGCCATGATTTTCTCGGATTTATGCCCCAATCTTCTGCCCCAAGCTTTGTTGGGGAAACTTGTGATTTCTATAACAAACTGGTCTATCATGATGCTGCTGCTAGTGCTAGTGCTTATTCTTGTGCTACTACTCCCAATCTTGATGAGTGTGTGGAGGTTGTTGCTGTTCACAGGAGGGGAAACTCAGGGAGTGGCAGGGTTTTCATGGAATATGAGTTTTTCCCAGTAAAAGATGGCAATGACACTACTTCCAAGGAGCTGGAATTGCCCTCAATAGGTTCAGTTGTTGTAGGTGGTGCTGAAGCTTCTTCTATCACTGCTGCAGCCTATGGAGATTCTGCTTCTAATTATGTTGATTTGTCTCTGAGGCTTTCTCGCTAG 978 0.4591 MASDQHNTFHEEGGGKSACSRSRKGPKKPPQRGLGVAQLERLRLQESWKKMNEGSSSGGGVLQVPLPTLHDHHHHQQQQLFQCHPPPVFAASGGVPMRYGAPSPNLGFQYFQHLQQHVINGHNNTIGGDCMLPSFGSGPPLLVGTPLETSKELSSIPNLHSQPECFDFCLKKTRFNEYNEKGSSNERGERALEIGPNGNGHDFLGFMPQSSAPSFVGETCDFYNKLVYHDAAASASAYSCATTPNLDECVEVVAVHRRGNSGSGRVFMEYEFFPVKDGNDTTSKELELPSIGSVVVGGAEASSITAAAYGDSASNYVDLSLRLSR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02053 325 PANTHER PROTEIN SPOROCYTELESS 16 324 IPR014855 GO:0003700
Gma12g02053 325 MobiDBLite consensus disorder prediction 1 36 - -
Gma12g02053 325 MobiDBLite consensus disorder prediction 50 78 - -
Gma12g02053 325 PANTHER OS01G0212500 PROTEIN 16 324 IPR040356 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02053 Gma-Chr12 41215439 41216820 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Gma12g02053 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02053 - - lang:109348179 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02053 12 41215439 41216820 Gma12g02053 12 41215439 41216820 ECH
Gma13g02501 13 39887065 39888459 Gma12g02053 12 41215439 41216820 GST