Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02047 ATGAGACAAGCTGGTGCATATTCAGGGTTACTGTGTGGTGGGGTATCGGGAAGGACAGGGCCCCACTCACTGCCCTTGGCAAGGATCAAGAAGATCATGAAGAATTCTGGGGAGGGTGTTAAGATGATATCAGGTGAGGCTCCAATTATTTTCTCCAAGGCTTGTGACCTCTTCATTGAGGAACTTACTAGAAGGTCCTGGATCATGGCCATTCAAGGCAAAAGGAGGACTTTGCACAAAGAGGATTTGGCTTCTGCTGTTATAGCCACTGATATATTTGATTTCTTGATCACTTTGGTTTCCAATTCTGACAGCCATGCAGTTGGTGGTGCCACAAATGTCATGGAGGTGGAAACTATAGATTACTCTTAA 372 0.4516 MRQAGAYSGLLCGGVSGRTGPHSLPLARIKKIMKNSGEGVKMISGEAPIIFSKACDLFIEELTRRSWIMAIQGKRRTLHKEDLASAVIATDIFDFLITLVSNSDSHAVGGATNVMEVETIDYS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02047 123 SUPERFAMILY Histone-fold 17 96 IPR009072 GO:0046982
Gma12g02047 123 Gene3D Histone, subunit A 15 102 IPR009072 GO:0046982
Gma12g02047 123 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Gma12g02047 123 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 106 - -
Gma12g02047 123 PANTHER HAP5 SUBUNIT OF HAP COMPLEX 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02047 Gma-Chr12 41132949 41133320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02047 22 104 CCAAT-HAP5 Transcription Factor Family AT1G54830 61.446 1.10e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma12g02047 CBFD_NFYB_HMF 2.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02047 - - gmx:100820378 243.817