Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02038 ATGGATTCACAACAGCTCTTCAGTTTCGGTGGTGTTACTAGTGCAGGATTACCTTACATGTCTTCTTTTCCCACTGTTCCATCGCTACCCAACAGTCTACTTAGATCCTTGAAATATGACACAGGAAACTCACCTAATTCACCCTTTTCCACTTATTTTGATTCTGATACTCTTTCAGCATTGAGTGACGGCCAGGAGCAATACAGCCCAGGAGAAATCCTCTCTGGTGTCAGCTCTTCACTGGAAACCAACCATTATATGTATAATAGATCAATCTCCACTTTGGACAGTTTCCCATTATATTCTGATCGGAACTCTCTTCTACAGAATGCGAGTTCTAATCAGAAAATCCAACATGCTTTGCTGGAGCTAGAAACTGCTTTGATGGCCCCGGATGACGATCAAGTTACCACACCGAATACATTGGCCGAGAGACACAGGTCCTGGAACAATGAGAACCATGTGTCACAACATAATACTCAAGCTCAGCCATCATATGCTACCGGCAATAGGCAGTCAAGTGAAGTTGTGCATGTAGAGAAACGGCAAAAGTTGATGGAAGAAGAAGCAACACTGGAAGCTTTCCCACCAAACAATTTGAAGCAATTGCTGATTGCATGTGCCAAAGCCCTGTCTGAAAACAACATGAATGATTTTGATCAATTGGTAGGAAGGGCTAAAGATGCTGTGTCCATCAATGGGGAGCCAATCCAGCGGCTTGGTGCTTACATGGTAGAAGGGCTTGTTGCAAGGACGCAAGCATCGGGGAATAGCATCTATCATGCCCTTAGGTGCAAAGAGCCTGAGGGTGATGAATTGCTCACTTACATGCAACTGCTGTTCGAAATCTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATCGCGGAAGCGTGCAGAAACGAGGATCGCATACACATCATAGACTTCCAAATTGCTCAGGGAACTCAATGGATGACTCTTCTTCAAGCGCTTGCCGCAAGACCTGGCGGTGCTCCCCATGTGCGGATCACAGGGATTGATGATCCTGTTTCCAAATATGCTCGTGGCGACGGACCAGAAGTTGTTGGCAAAAGGTTGGCCTTGATGTCTGAGAAATTTGGCATCCCAGTTGAGTTTCATGGGGTGCCAGTTTTTGCTCCAGATGTGACAAGGGAAATGCTTGATATCAGGCCAGGAGAGGCCTTGGCTGTGAACTTCCCCTTGCAACTCCATCACACAGCTGATGAGAGTGTTCATGTGAGCAACCCAAGGGATGGACTTTTGAGATTGGTAAGGTCACTTTCTCCCAAGGTGACCACATTGGTGGAGCAGGAATCAAACACAAACACAACCCCTTTCTTCAACAGGTTCATTGAAACCTTGGATTACTACTTGGCAATCTTTGAGTCCATTGATGTCACCCTCCCAAGAGACAGCAAGGAGAGGATTAATGTGGAGCAACATTGTCTGGCCAGGGATATTGTCAATATCATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAACTGTTCGGCAAGTGGAAGTCAAGGTTAAAGATGGCCGGCTTCCAGCAATGTCCTTTGAGTTCTTATGTGAATTCTGTGATAAGAAGCCTTCTGAGGTGCTATTCAGAACACTATACACTGGTGGAGAAGGATGGAGCCATGTTGTTAGGGTGGAAGGACAGAAATTTGATATCAGCTTCAGCCTGGCATTGCTAA 1716 0.4592 MDSQQLFSFGGVTSAGLPYMSSFPTVPSLPNSLLRSLKYDTGNSPNSPFSTYFDSDTLSALSDGQEQYSPGEILSGVSSSLETNHYMYNRSISTLDSFPLYSDRNSLLQNASSNQKIQHALLELETALMAPDDDQVTTPNTLAERHRSWNNENHVSQHNTQAQPSYATGNRQSSEVVHVEKRQKLMEEEATLEAFPPNNLKQLLIACAKALSENNMNDFDQLVGRAKDAVSINGEPIQRLGAYMVEGLVARTQASGNSIYHALRCKEPEGDELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGPEVVGKRLALMSEKFGIPVEFHGVPVFAPDVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVRSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLKMAGFQQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKDRNLISASAWHC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02038 571 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 570 IPR005202 -
Gma12g02038 571 MobiDBLite consensus disorder prediction 153 172 - -
Gma12g02038 571 MobiDBLite consensus disorder prediction 150 172 - -
Gma12g02038 571 Pfam GRAS domain family 200 569 IPR005202 -
Gma12g02038 571 ProSiteProfiles GRAS family profile. 191 570 IPR005202 -
Gma12g02038 571 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02038 Gma-Chr12 40991046 40992761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02038 121 569 GRAS Transcription Factor Family AT1G50600 55.556 3.77e-175 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma12g02038 GRAS 3.8e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02038 - - gmx:100817877 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02038 12 40991046 40992761 Gma12g02038 12 40991046 40992761 ECH
Gma13g02520 13 40115548 40117281 Gma12g02038 12 40991046 40992761 GST
Gma12g02038 12 40991046 40992761 Gma12g01245 12 16622337 16626006 PCT
Gma12g02038 12 40991046 40992761 Gma06g02450 06 46785426 46788692 PCT
Gma12g01245 12 16622337 16626006 Gma12g02038 12 40991046 40992761 PCT
Gma06g02450 06 46785426 46788692 Gma12g02038 12 40991046 40992761 PCT