Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02035 ATGAAAGAGGAGTCAACTGGACTTATCATTGGGATTTCCATAGGTGTTGTGATTGGAGTTGGTTTGGCAATTTCGGCATTGTTCTGTCTTAGATATCACCGGAAGCGGTCGCAGATTGGCAATAGCAGTTCCCGGAGGGCACATACCATACCTATCCGTGAAAATGGTGTTGATTCTTGCAATATTCTATCAGACTCAACCTTAGGTCCAGAATCACCTGTGAGGTCTGGACGAAATGGCATGTCCTTATGGCTTGATGGCTTCAAGAAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGACAAGGCGCATTTGGTCCTGTATATAAAGCTCAGATGTCTACTGGCGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCAGACAGAGgttatgttgttgggaaggttacatcatagaaatctggtcaatttggtcgggtattgtgcagaaaaggggcaacatatgcttgtatatgtctacatgagtaaaggaagcttggCTTCCCACTTGTATAGTGAAGAGAATGGAGCTCTGGGCTGGGATTTGAGGGTTCATATAGCTTTAGACGTAGCAAGAGGCATAGAGTATCTTCATGACGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCTAACATTCTCTTGGACCAGTCCATGCGAGCCAGGGTCGCCGATTTTGGACTCTCAAGAGAAGAGATGGTGGATAAACATGCTGCAATTCGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGGACATTCACCAAGAAAAGTGATGTATACAGTTTTGGGGTCTTGCTCTTTGAGCTCATAGCTGGCCGAAATCCTCAGCAAGGTCTTATGGAGTATGTTGAGCTTGCAGCAATGAACACCGAGGGAAAAGTTGGTTGGGAGGAGATAGTTGATTCTCGGCTCGAGGGAAAATGTGATTTTCAAGAGCTGAATCAAGTGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCGAAGAAACGCCCTTCAATGAGGGACATAGTGCAAGTGTTTACACGGATCCTCAAATCAAGGTACCAAAGGAATCATCATCACAAAAAGTCTCTCTCAGCCACAGTTGATGAAGTTTCCATTGATGTTGATCAGCTAGAAACCAAGAGTTCTGTCACTGATCACAGAAGAGAAGAATCTATAGATAGTACAGCTGACATTTATGATTTGTAG 1296 0.3997 MKEESTGLIIGISIGVVIGVGLAISALFCLRYHRKRSQIGNSSSRRAHTIPIRENGVDSCNILSDSTLGPESPVRSGRNGMSLWLDGFKKSSNMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGIEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLEGKCDFQELNQVAALAYKCINRAPKKRPSMRDIVQVFTRILKSRYQRNHHHKKSLSATVDEVSIDVDQLETKSSVTDHRREESIDSTADIYDL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02035 431 PANTHER OS01G0253100 PROTEIN 5 405 IPR045271 GO:0004714|GO:0006468
Gma12g02035 431 SUPERFAMILY Protein kinase-like (PK-like) 102 389 IPR011009 -
Gma12g02035 431 MobiDBLite consensus disorder prediction 409 431 - -
Gma12g02035 431 Coils Coil 390 410 - -
Gma12g02035 431 SMART serkin_6 113 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02035 431 Pfam Protein tyrosine and serine/threonine kinase 115 374 IPR001245 GO:0004672|GO:0006468
Gma12g02035 431 MobiDBLite consensus disorder prediction 409 425 - -
Gma12g02035 431 ProSiteProfiles Protein kinase domain profile. 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g02035 431 CDD STKc_IRAK 119 378 - -
Gma12g02035 431 Gene3D Phosphorylase Kinase; domain 1 84 188 - -
Gma12g02035 431 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 405 - -
Gma12g02035 431 Gene3D Transferase(Phosphotransferase) domain 1 189 404 - -
Gma12g02035 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02035 Gma-Chr12 40972215 40975912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02035 24 372 Glycoside Hydrolase AT3G07070 39.946 8.60e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma12g02035 PK_Tyr_Ser-Thr 3.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02035 - - gmx:100817345 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02035 12 40972215 40975912 Gma12g02035 12 40972215 40975912 ECH
Gma13g02522 13 40137873 40142611 Gma12g02035 12 40972215 40975912 GST
Gma12g02035 12 40972215 40975912 Gma12g01237 12 16509929 16513793 PCT
Gma12g02035 12 40972215 40975912 Gma06g02451 06 46802924 46807364 PCT
Gma12g01237 12 16509929 16513793 Gma12g02035 12 40972215 40975912 PCT
Gma06g02451 06 46802924 46807364 Gma12g02035 12 40972215 40975912 PCT