Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02032 ATGCCAACTGTGTGGTTCTCTTTGAAGAGATCTCTACATTGCAAATCAGAGCCATCAGATGTTCATGACCCCAAAACAAGGAAGCAGTTGGCCACAATCTTGACCAAAAAGGGAGGTTCAAGTAGGTCAGGTTGTTCAAGGTCCATAGCCAATCTTAAAGATGTAATCCATGGGAGCAAGAGGCATCTAGAGAAGCCACCAAGTTGCAGCCCAAGATCCATTGGTAGCAGTGAGTTTCTCAACCCAATAACCCATGAGGTGATCCTAAGCAACTCAAGGTGTGAGCTGAAAATCACTGGCTATGGAGGGTTCCAAGAAGGAGGGGTTGGAAGTGATGGTGGAGGAGGTGCCAATAATCGAAGTGCCACAAGTGGTGACTTGAGTACCTTTGTGGGCACTTTAAGGCCTGGCACTCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACTACTTCCACTCCTCCTAGGAAATCTCCTTTCCATTCATCGGATAAAGAAGGGTCAGGTTTGCATGGTGTTGGAGTACTTGGACTTCATTCTAGCACAAGGGTACCTCTTGAGACTGATTCAAATGTGTCTTCCACTGTCACTTGCCACAAATGTGGAGATCAATTCAACAAATGGGAAGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGGACGAGCTGGTTGAAGTCTGAGAAACAATGTGGTAGAATTGAGAGAGTTTTGAAAGTGCATAACATGCAAAAGACTCTGGCTAGGTTTGAGGAGTATAGGGAGTTGGTGAAAATCAAGGCTAGTAAACTCCCCAAGAAGCATCCAAGGTGTCTTGCAGATGGCAATGAGCTTTTGAGGTTCTATGGAACCACTGTTGCATGCTCTCTTGGTCTCAGTGGCTCTTCCAGCTTGTGTTTATCTGAAAAGTGCTATGTTTGTAGAATCATCAGAAATGGGTTTTCTGCCAAGGAGGAGCTCAAGGGTGGAGTAGGTGTTTTCACTACTTCCACAAGTGGAAGGGCTTTTGAATGTATTAAGGTTTTTGACCATGACCCTTCATTGAGAAAAGCACTTATAGTCTGCAGGGTCATTGCTGGCAGGGTCCATAGACCACTGGAGAACATTCAGGAAATGGCAGGACAAACAGGCTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATTCTAGAGGTCTTCTTCCTTGTTTTGTGGTAATTTGCAAGCCATGA 1311 0.447 MPTVWFSLKRSLHCKSEPSDVHDPKTRKQLATILTKKGGSSRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVGSDGGGGANNRSATSGDLSTFVGTLRPGTPGPGGHPTMHYFNPSFRTTSTPPRKSPFHSSDKEGSGLHGVGVLGLHSSTRVPLETDSNVSSTVTCHKCGDQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSEKQCGRIERVLKVHNMQKTLARFEEYRELVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLSGSSSLCLSEKCYVCRIIRNGFSAKEELKGGVGVFTTSTSGRAFECIKVFDHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNSRGLLPCFVVICKP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02032 436 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 436 - -
Gma12g02032 436 SUPERFAMILY ADP-ribosylation 227 435 - -
Gma12g02032 436 ProSitePatterns Zinc finger C2H2 type domain signature. 204 225 IPR013087 -
Gma12g02032 436 Gene3D - 217 435 - -
Gma12g02032 436 PANTHER - 2 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02032 Gma-Chr12 40954929 40956734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02032 1 436 C2H2 Transcription Factor Family AT5G54630 66.953 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02032 - - gmx:100816798 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02032 12 40954929 40956734 Gma12g02032 12 40954929 40956734 ECH