Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02027 ATGGTGGGAACTCCAATTAACGGAAGAACAAGGCTATCTTTTGGTGCTGTTAATGGTGGCCATGATCTTGGCCCCAGTAGTGCTCCACCAAGCAATGCTGGCTCAGATTATGGCATTATAGAGTTCACAAGAGAGGATGTGGAGGCCTTGCTGAATGAAAAGGCCAAAAGGAAGGACAGATTTAATTACAAGGAAAGATGTGAAAACATGATGGACTATATAAAAAGGCTGAAGGTTTGTATCAGGTGGTTCCAAGACCTTGAGATTAGCTACTCACTAGAGCAAGAAAAGTTGAAGAGTTCATTGGAATTGGCCCAGCAAAAATGCACGGAAATAGAGCTGCTGCTAAAAATCAAGGAAGAAGAGCTAAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTTTACAAGAGAAATTGGTGAAGGAAGAATCCGAAAAAACAGCAGCAGCAGAATCTCATCTTAAAGAGAGAGAAGCTAGGCTTAACTTTGAGAGGTCACAGAGTACACTGCAGGAGGATCTTGGACGAGCACAACGAGAGCTCCAAAGTGCAAATCAGAAGATATCATCTCTCAATGACATGTATAAGCGGTTACAGGATTACATAACAAGCTTGCAGCAGTACAATGGAAAACTGCATTCAGAGCTTTCTACAGTTGAAAATGAACTTAAGCGTGTAGAGAAAGAGAAAGCTACTGTACTGGAGTCCCTTACCATGTTAAAGGGTCAGCTTACTTTGTCTATGgcttctcaagaagaggccacgaaacagaaggatgccttggctagtgaagttacatctctccgagtagagttgcaacatgcgagggatgatcgagaccaccaattatctcaagcgcaaactttaacatctgaattagagaaatctaaagattctacagaaaagtcctgctctgaactgaacaaattgactttaagaacaaatgaacttgaggcaaaatgtgctttgcaagatgagcggataaaggtactacaagagcagctaactactgctgaggagaaacttcaggtttgtgacatatctgcaagtgagacaagaatagaatatgaagggcaacaaaaacttgtacacgagttgcaaagacgtttggcagatgcagaaaataaagttatagaaggggagaagctgaggaaagaattgcacaataacattttggaactaaaagggaacatccgcgtgttctgtagagtgcggcctttgttacctgatgaaggttctagcacagaaggaaagattatatcttatcccacatcgatggaagcttctggacggggcattgaattgacacaaaatggccaaaaacattctttcacatatgataaagtttttgcacctgatgcatcacaagaagaagtttttatcgaaatttcacagcttgtgcaaagtgctcttgatggttataaggtttgcatttttgcgtatggtcagacagggtcagggaaaacctatacaatgatgggaaggcctggacatccagaagaaaagggcttgattcctcgttcacttgaacaaatatttcaaacaaaacaatctcagcaaccccaaggctggaaatatgaaatgcaggtgtcaatgttggaaatatacaatgaaaccattcgtgatctgttatctacaaataagtcatcatcagaaggaacaccaacacgagtggaaaatggtactcccgggaagcaatacacaatcaaacatgatgccaacggaaatacacatgtttctgatctcacagtagtggatgttcagagtgtaaaagaggttgcatttcttttaaatcaagctgcaaatagcagATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCTAGAAGTCATTTTGTATTCACTCTTCGATTATATGGTGTAAATGAGAGCACTGACCAACAAGCACAAGGTATTCTAAATCTCATTGATCTTGCTGGGAGTGAGCGTCTTTCAAGGAGCGGGTCAACTGGGGACCGATTGAAAGAAACCCAAGCAATAAATAAAAGTCTGTCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGAGGATCATATCCCATTCAGGAACTCAAAGCTTACATACCTTCTTCAGCCTTGTCTAGGTGGTGACTCAAAGACATTAATGTTTGTGAACATCTCTCCTGACCAAGCTTCAGCTGGAGAGTCACTATGCTCACTACGGTTTGCGTCAAGAGTCAATGCTTGTGAAATTGGGACACCTCGCTGTCACACCAGTGGACGCCCTGTAGAATCTCGCTTGACCTATTTCTAA 2289 0.2232 MVGTPINGRTRLSFGAVNGGHDLGPSSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEISYSLEQEKLKSSLELAQQKCTEIELLLKIKEEELNSIIVEMRRNCTSLQEKLVKEESEKTAAAESHLKEREARLNFERSQSTLQEDLGRAQRELQSANQKISSLNDMYKRLQDYITSLQQYNGKLHSELSTVENELKRVEKEKATVLESLTMLKGQLTLSMASQEEATKQKDALASEVTSLRVELQHARDDRDHQLSQAQTLTSELEKSKDSTEKSCSELNKLTLRTNELEAKCALQDERIKVLQEQLTTAEEKLQVCDISASETRIEYEGQQKLVHELQRRLADAENKVIEGEKLRKELHNNILELKGNIRVFCRVRPLLPDEGSSTEGKIISYPTSMEASGRGIELTQNGQKHSFTYDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNKSSSEGTPTRVENGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRLYGVNESTDQQAQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASAGESLCSLRFASRVNACEIGTPRCHTSGRPVESRLTYF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02027 762 Coils Coil 102 147 - -
Gma12g02027 762 Coils Coil 253 280 - -
Gma12g02027 762 ProSiteProfiles Kinesin motor domain profile. 399 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 739 IPR027417 -
Gma12g02027 762 Coils Coil 40 60 - -
Gma12g02027 762 Coils Coil 169 203 - -
Gma12g02027 762 PANTHER KINESIN-LIKE PROTEIN 7 761 - -
Gma12g02027 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 761 - -
Gma12g02027 762 Pfam Kinesin motor domain 405 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 Coils Coil 316 343 - -
Gma12g02027 762 Coils Coil 211 238 - -
Gma12g02027 762 Gene3D Kinesin motor domain 345 743 IPR036961 -
Gma12g02027 762 Coils Coil 358 392 - -
Gma12g02027 762 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 PRINTS Kinesin heavy chain signature 611 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 PRINTS Kinesin heavy chain signature 642 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 PRINTS Kinesin heavy chain signature 691 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g02027 762 CDD KISc_C_terminal 397 743 - -
Gma12g02027 762 MobiDBLite consensus disorder prediction 276 302 - -
Gma12g02027 762 SMART kinesin_4 397 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02027 Gma-Chr12 40907754 40913546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02027 371 753 Calmodulin-binding Proteins AT5G65930 38.642 1.77e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02027 K10405 - gmx:100814696 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02027 12 40907754 40913546 Gma12g02027 12 40907754 40913546 ECH
Gma13g02530 13 40191183 40197386 Gma12g02027 12 40907754 40913546 GST
Gma12g02027 12 40907754 40913546 Gma12g01232 12 16240503 16246248 PCT
Gma12g02027 12 40907754 40913546 Gma06g02456 06 46907595 46913553 PCT
Gma12g01232 12 16240503 16246248 Gma12g02027 12 40907754 40913546 PCT
Gma06g02456 06 46907595 46913553 Gma12g02027 12 40907754 40913546 PCT