Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02009 ATGGCTACCATCATTTTGAGGTCTAATGAAGTGGTTCATGCCTTGGGCTTGTTTTGCATCTTGCTGTTGGTGCACAAGGGTGATGCCTATGAATTTGTAGTTGGAGGGCAAAAGGGTTGGAGTATCCCAAGTGACCCCAATTCCAACCCTTACAGTCAATGGGCACAAAAGAGCCGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCCATCTGGCCAAGACTCAGTGATCCAAGTAAGTAGCCAAGACTATGCAAGTTGCAACACTGATGCATACAGTCAAAAATTCTCAGACGGCCACACAGTCATCAATCTCAACCAATCAGGGCCTCACTTCTTCATCAGTGGAAACAAAAACAGCTGTCTCAAAAATGAGAAGCTGGTGGTGATTGTGCTGGCAGACAGGAACAACAAAAACACAAACCAAACAAGCCCTCCCTCTCCTAAttctccttctccttctccttctccttcACTTTCAACACAGTCATTGGCTCCTTCACcagcaccttctcagcaagtggctccacctccactttctccagtggcagctcctcctcagcaagaggctccttctccaccatctccagCCACAAATAACCCCACTCCAGCTCCTGTTAGTGATCAACCTTCTCCTCCTTCTCCTCCTCATAATGCTGCTTCTTCAATCTTGGTCAACTTTGCTTGTTCTGTTGGAGCGTTCATTGCTTCAGTTCTGGTTTTTTCTTTCTGA 735 0.381 MATIILRSNEVVHALGLFCILLLVHKGDAYEFVVGGQKGWSIPSDPNSNPYSQWAQKSRFQVGDSLVFNYPSGQDSVIQVSSQDYASCNTDAYSQKFSDGHTVINLNQSGPHFFISGNKNSCLKNEKLVVIVLADRNNKNTNQTSPPSPNSPSPSPSPSLSTQSLAPSPAPSQQVAPPPLSPVAAPPQQEAPSPPSPATNNPTPAPVSDQPSPPSPPHNAASSILVNFACSVGAFIASVLVFSF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02009 244 PANTHER BLUE COPPER PROTEIN 5 243 IPR039391 GO:0009055
Gma12g02009 244 CDD OsENODL1_like 30 133 IPR041846 -
Gma12g02009 244 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
Gma12g02009 244 Gene3D - 30 145 IPR008972 -
Gma12g02009 244 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 243 - -
Gma12g02009 244 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gma12g02009 244 MobiDBLite consensus disorder prediction 138 221 - -
Gma12g02009 244 PRINTS Proline rich extensin signature 147 168 - -
Gma12g02009 244 PRINTS Proline rich extensin signature 171 187 - -
Gma12g02009 244 PRINTS Proline rich extensin signature 194 211 - -
Gma12g02009 244 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Gma12g02009 244 MobiDBLite consensus disorder prediction 171 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02009 Gma-Chr12 40690436 40692154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02009 11 224 Phytocyanin Superfamily AT3G20570 45.581 9.58e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02009 - - gmx:100788637 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02009 12 40690436 40692154 Gma12g02009 12 40690436 40692154 ECH
Gma13g02550 13 40392451 40394001 Gma12g02009 12 40690436 40692154 GST
Gma12g01216 12 15848859 15850782 Gma12g02009 12 40690436 40692154 PCT