Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02001 ATGCATCACCGCAGATTCAGCAAATTAATACATGTGGCTGACCCAGATGAGCCCGAGTCAGGGCCCGAGCCCGCCTCAGAAGCTGGGCCTGCTTCTCCTTCTTCCGGTGAAGACACTAAAACTGAAGCACCGTCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGAATTATCCACCGTCTGATTCATGGGCCTGGAGGAAGTACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTTGAGCGAAGCCGTGTGGACCCCACAAAGCTCATAGTCACCTACGCTTATGAACACAACCACTCCCTTCCTTTTCCAAAATCAAATTCTTCCGCCGCTTCCGCCGCCGTAAGCGACGGCGCAGCCGTCTTGCCGATAGAGTCCGCCGCCAGGTTTCCGCCGGAGGAGGAGATGACGGTGTTCGCGACAGACTCCGACCTCGAACTCGCCGGCGACGCGGCGGTTCTTCTCAGCCACCACCACCACCACTTCGGCTGGTTCGATGACGTAGCGTCCACCGGCGTCCTAGAGAGCCCGATCTGCGGCGAGGTAGATGACGTGGCGGTGCCGATGAGAGAAGAGGACGAGTCGCTCTTCGCCGATCTCGGCGAGTTGCCGGAGTGCTCGGCAGTTTTCCGGCGGAGGAATATTCCGGCGACCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA 792 0.5833 MHHRRFSKLIHVADPDEPESGPEPASEAGPASPSSGEDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGENYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPFPKSNSSAASAAVSDGAAVLPIESAARFPPEEEMTVFATDSDLELAGDAAVLLSHHHHHFGWFDDVASTGVLESPICGEVDDVAVPMREEDESLFADLGELPECSAVFRRRNIPATSAIRCGGITG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02001 263 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g02001 263 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g02001 263 MobiDBLite consensus disorder prediction 1 78 - -
Gma12g02001 263 SUPERFAMILY WRKY DNA-binding domain 73 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g02001 263 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g02001 263 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g02001 263 PANTHER OS01G0750100 PROTEIN 24 254 - -
Gma12g02001 263 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 24 254 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02001 Gma-Chr12 40605484 40608475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02001 3 250 WRKY Transcription Factor Family AT3G58710 51.154 3.29e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma12g02001 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02001 - - gmx:100170680 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02559 13 40453385 40456315 Gma12g02001 12 40605484 40608475 GST