Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01994 ATGGATGAGACAATTTGCGTATCTGAAGAAGATCATAAGAGTGGAAGTAGCAAACCCTCTTCTCCAAGTCTTAGAAGAAAACGTTCATTTTTCGATTTGAATGAAGAAGCTGTGGATGGTGGTGGAGATGATAGCACCAGTGATGATGACCCCATCAATAGCAATGACATTTCATCACAAGAAGGTAATTTGAGTAGCAATAATAACTCTAGTGAAGAAGGGAAGGAGCGTGCATCTACGGTTAGGCAATATGTTCGGTCCAAAATGCCAAGGCTCCGTTGGACTCCTGATCTCCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCCAAGTTGGTTCTCCAGTTAATGAATGTGAGAGGACTCAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCTCGCAATAGGTCAATGCAAGGAAGGCATAGTATTTTTTATATGTACGGAAGACTTAATGCCCCACGACACTTTGGGAATGATAATAGAAATTATTTGCCATCATCTGCGTTTATGGAACAAACACCCTATGAAATCAGTGCTCATGGCTCTTCAAGATTACACCCGACAGCACTCTTCAATAGTAAAATGATGATAAGATCAAGTTCAGGGTGGGACAAAGATTTATATAATTCTCAGTCGTATCAACGTAGTTTCTGCAGTCCTAACCTCACTGGGCACGCGAAGTTTGATGCTGAGGTTCATGATGTGAAAAATCGAATGCCAGAATTCATAAATCAGGTTCAAGTATGGAAACAAGGAGGAATACCTTTCATATATTTAGATTACCTATTGATCGAGGTGAGTCCAGTTCTAGGGAGTTGCCCACGTGAAAGCATGTATATTGAGAAGATGCTTCTGGTGATAGAGAGGATTTTGGTGAACAGCACAGGTGAGAAGCAGAACCTGCATATGTACACCTGCACATACACTCCTCAACTTAATTAG 1008 0.4127 MDETICVSEEDHKSGSSKPSSPSLRRKRSFFDLNEEAVDGGGDDSTSDDDPINSNDISSQEGNLSSNNNSSEEGKERASTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSRNRSMQGRHSIFYMYGRLNAPRHFGNDNRNYLPSSAFMEQTPYEISAHGSSRLHPTALFNSKMMIRSSSGWDKDLYNSQSYQRSFCSPNLTGHAKFDAEVHDVKNRMPEFINQVQVWKQGGIPFIYLDYLLIEVSPVLGSCPRESMYIEKMLLVIERILVNSTGEKQNLHMYTCTYTPQLN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01994 335 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 44 233 - -
Gma12g01994 335 MobiDBLite consensus disorder prediction 51 74 - -
Gma12g01994 335 Pfam Myb-like DNA-binding domain 92 142 IPR001005 -
Gma12g01994 335 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Gma12g01994 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 146 IPR017930 -
Gma12g01994 335 MobiDBLite consensus disorder prediction 1 16 - -
Gma12g01994 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 44 233 IPR044848 GO:0003700
Gma12g01994 335 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 145 IPR006447 GO:0003677
Gma12g01994 335 MobiDBLite consensus disorder prediction 1 82 - -
Gma12g01994 335 Gene3D - 89 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01994 Gma-Chr12 40515008 40520646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01994 78 151 G2-like Transcription Factor Family AT2G42660 75.676 2.09e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma12g01994 Myb_DNA-binding 5.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01994 - - gmx:102668520 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01994 12 40515008 40520646 Gma12g01994 12 40515008 40520646 ECH
Gma13g02567 13 40522232 40524918 Gma12g01994 12 40515008 40520646 GST