Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01989 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGTTCTCAGGATGAGATCTTAAGTAATAAGGAGTCTCCTCGACATTTTGACAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACACTCTGGCGCATTGGAGTGCTTTCAGAACCAATACCAAATGGTTTCTATTCAGTCATTCCGGAGACAAGACTCAAGGAACTTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTCTGGGTGGAGAGGGTTTTAAGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGCTATCCATGTTAAAGAAATTAATTATGGCCTTAGTTAGAGGATTAAACTCTAATCCAGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAAGCTCTCACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGAGCTATTGAATGTCAAGACTCATACAAGCATATGTCTGTGATCGTTGTATTAAATTCCGTGGAAATGCTGGTTGATCTTATGCGATTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCTAACAGCCCTTTATTTGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATGTATCAGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGTTTGTCACATAGTGAACCCAACATTGCCACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGGCGGTCCATGCTTAGTGGTGATAGGACAACGTTTAGAGATTTTGCCGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGACAACACATCCTCGTCAGAAGCTCGTCGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGAGATGATATCGTAAGGGCTGTAAGGGCAATGAATGAAACTCTGAAGCAAAATCGTCTTTTGAGAGAACGAGGGGATGATAACTCATTCCCCAATTCTCCAAACAATAGTAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTCCATCTTGATGGCCATGATGAAAGATCTGCCCTCTATTCTTTTCAGCGTGACCAAGGAGCTTCACAAAAGGCAATGTCATTACCATCTTCACCACACGATTATGGAGGCCAGGCTTCTGAGAGAAGTGGATCATCAAGATACAGAGTGAATGATGAAATGGAGTCAACATGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAAAATGGAATATTGACTTCTCCGAATTGACTGTTGGAACTCGCGTAGGGATTGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAACGAGATATCTATTCTGAGCCGGCTCCGACATCCTAATGTTATCTTGTTTCTTGGTGCTTGCACAAAGCCTCCACGCTTGTCAATGGTCACAGAATATATGGAGTTGGGATCATTGTATTACTTGATACATTTGAACGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACACAGAATGAAGGTTGTTCACCGTGATCTGAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACTGTCAAAATATGTGATTTTGGGCTTTCAAGAATAATGACAGAGTCTCCCATGAGAGATTCTTCATCAGCTGGAACGCCAGAATGGATGGCTCCTGAGCTTATTCGAAATGAACCGTTCACAGAAAAATGTGATATCTTCAGCCTTGGGGTGATAATGTGGGAACTCTGTACCTTGAACAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCTGTTGCGAATGAGGGTTCCAGATTGGAGATACCAGAAGGCCCTCTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAATGTCATGAACGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGACATCGAGTACTCCTTGTGCTGA 2433 0.4217 MEETREDAGPAEQGPSNVSWWPSDFVEKFGSVSLGSQDEILSNKESPRHFDKDVLSSQKASQTLWRIGVLSEPIPNGFYSVIPETRLKELFDSIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKKLIMALVRGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDESSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAIECQDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFHRRFEASSNVSGLSLRNVMLRSNSSLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSMLSGDRTTFRDFADDQATSRSSYRSDNTSSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSFPNSPNNSSSDANLQKNVSNFHLDGHDERSALYSFQRDQGASQKAMSLPSSPHDYGGQASERSGSSRYRVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLNGQKKKLNWRRRLRMLRDICKGLMCIHRMKVVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAECHERPSCEEILSRLVDIEYSLC 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01989 810 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Gma12g01989 810 ProSitePatterns Protein kinases ATP-binding region signature. 560 581 IPR017441 GO:0005524
Gma12g01989 810 SUPERFAMILY Protein kinase-like (PK-like) 528 802 IPR011009 -
Gma12g01989 810 CDD STKc_MAP3K-like 560 802 - -
Gma12g01989 810 MobiDBLite consensus disorder prediction 347 410 - -
Gma12g01989 810 MobiDBLite consensus disorder prediction 1 22 - -
Gma12g01989 810 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 808 - -
Gma12g01989 810 Pfam Protein tyrosine and serine/threonine kinase 555 802 IPR001245 GO:0004672|GO:0006468
Gma12g01989 810 SMART serkin_6 554 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01989 810 MobiDBLite consensus disorder prediction 448 463 - -
Gma12g01989 810 MobiDBLite consensus disorder prediction 387 402 - -
Gma12g01989 810 MobiDBLite consensus disorder prediction 437 463 - -
Gma12g01989 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Gma12g01989 810 MobiDBLite consensus disorder prediction 485 519 - -
Gma12g01989 810 MobiDBLite consensus disorder prediction 485 514 - -
Gma12g01989 810 Gene3D Phosphorylase Kinase; domain 1 547 632 - -
Gma12g01989 810 ProSiteProfiles Protein kinase domain profile. 554 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01989 810 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 808 - -
Gma12g01989 810 Gene3D Transferase(Phosphotransferase) domain 1 633 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01989 Gma-Chr12 40479929 40492980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01989 1 810 MAP Kinase Kinase Kinase AT3G58640 72.107 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gma12g01989 PK_Tyr_Ser-Thr 4.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01989 - - gmx:100803469 1560.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01989 12 40479929 40492980 Gma12g01989 12 40479929 40492980 ECH
Gma13g02570 13 40544493 40556828 Gma12g01989 12 40479929 40492980 GST