Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01968 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGCAAGGTTTACACTGCAAAGGGTCCTCGTGATCGAAGGGTTAGGCTCTCAGCACACACTGCTATTGAGTTCTATGATGTTCAAGATCGTTTAGGCTATGACAGACCAAGCAAAGCCGTGGACTGGCTCATCAAGAAGGCCAAGAATGCTATTGATAAGCTTGGTGAGCTTCCTCCATGGCACCCTACTCCTAACACTGCTGCAGATGCTGAGAACAACAACAACAACAACAATGCAGGGTCAAGTGACATGGCCATTGCAGCAGAACAATCTGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCGGCTTTCATTCCCTCACCTATTGACACTGATGCAATAGCCTTCTTTCCAACAACCACTGCAACCTCCTCCATCAATTTCCAAACCTACCCTCCTAATATAATCTCAAGAACCAACAACTCCACTGAGGATCTTGGCCTTTCCCTTCACTCCTTCCAAGACCCTGGTTTGATTCATGGCCAGACCCAAGCAGGTGCAAACCAGACACAAACACCTTCCAATGACCAAAGCCTCTTCTCTGGCTCAACTCAAGTGGGGTTTGAGGCCAATTACCCCAGGATTGTCACTTGGAACAGTGATGCAAGCATAGATATGAACAGAACCGGGTTCATGGTCAATTCACCAGCACTTCTAGGCCAAGGTGGTTCTGCTGCATTTTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGAGATTCCAATGGCTTCATCAGAACATCACAAGTCACAGCCAATTCAACAAGCTTCAATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCGGGGTTCTGCATTCCTGCTAGAATCCAAGGAGAGGATGGAGTTGGTCCTGACAAGCCATCATCTTCTTCTCCTAATTCTCATCACTGA 1032 0.4767 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLGELPPWHPTPNTAADAENNNNNNNAGSSDMAIAAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPNIISRTNNSTEDLGLSLHSFQDPGLIHGQTQAGANQTQTPSNDQSLFSGSTQVGFEANYPRIVTWNSDASIDMNRTGFMVNSPALLGQGGSAAFSQRGTLQSSFSPSLRPWSEIPMASSEHHKSQPIQQASIFGSRFLSDALPGFCIPARIQGEDGVGPDKPSSSSPNSHH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01968 343 MobiDBLite consensus disorder prediction 94 109 - -
Gma12g01968 343 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Gma12g01968 343 MobiDBLite consensus disorder prediction 83 109 - -
Gma12g01968 343 MobiDBLite consensus disorder prediction 322 343 - -
Gma12g01968 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 343 IPR005333 GO:0003700
Gma12g01968 343 PANTHER TRANSCRIPTION FACTOR TCP4 2 343 - -
Gma12g01968 343 Pfam TCP family transcription factor 23 127 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01968 Gma-Chr12 40274720 40277166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01968 8 343 TCP Transcription Factor Family AT3G15030 42.040 4.88e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma12g01968 TCP 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01968 - - gmx:100796390 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01968 12 40274720 40277166 Gma06g02117 06 36912506 36914909 ECH
Gma12g01968 12 40274720 40277166 Gma12g01482 12 29278343 29280277 ECH
Gma12g01968 12 40274720 40277166 Gma12g02144 12 42284457 42286237 ECH
Gma12g01968 12 40274720 40277166 Gma13g02409 13 38857883 38859043 ECH
Gma12g01968 12 40274720 40277166 Gma12g01968 12 40274720 40277166 ECH
Gma12g01968 12 40274720 40277166 Gma06g02556 06 48751635 48753217 ECH
Gma13g02588 13 40739512 40740927 Gma12g01968 12 40274720 40277166 GST