Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01964 ATGGCGCAATTACCTCCAAAGATCCCAAACATGTCACCAAGTTGGCCAGATTTCTCTTCACACCAACAGAAGATGCAATTGCCACCTCTTAATAACAACGGCACCATCACCAACAACTATCATCAGCACAATCAGAACCCTTCTTGGGTGGATGAGTTTCTCGACTTCTCCTCGGCCCGGCGCGGCGTTCACCGGCGGTCGGTGAGCGATTCCATCACCTACTTGGATTCACCAGTGAAGTGTGGAGGGAATAAAAACAACAACAACAATGAGAACGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCAACCACCTTGTCCTCCTCTAACCCTTCAAGCCCTTACGATCAGAACTTCATCAATGATGAGAAGGAGAAGAAGGAGGAGGAAGAGGAGCACCACCACCACCACCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCAAACAGGAAATTATGCAGCTTCCAAATGACACCAATACTTGTTCTTCCAGCGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGATTGCTTCTAAATGTCGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTTAGGCAAGTTTATTACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCTGGGTCACCATTACCATCACCAAAGCCTATATGTGATGCTCAAACAGAAAAGGAAGCACAACTTCTCAACGCTTGA 963 0.4559 MAQLPPKIPNMSPSWPDFSSHQQKMQLPPLNNNGTITNNYHQHNQNPSWVDEFLDFSSARRGVHRRSVSDSITYLDSPVKCGGNKNNNNNENEFDKFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPYDQNFINDEKEKKEEEEEHHHHHQLKNEADEVESQCKQEIMQLPNDTNTCSSSERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYYQQSLKKMENAAGSPLPSPKPICDAQTEKEAQLLNA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01964 320 MobiDBLite consensus disorder prediction 115 165 - -
Gma12g01964 320 Pfam bZIP transcription factor 191 235 IPR004827 GO:0003700|GO:0006355
Gma12g01964 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Gma12g01964 320 MobiDBLite consensus disorder prediction 1 43 - -
Gma12g01964 320 PANTHER BASIC LEUCINE ZIPPER 34 1 320 - -
Gma12g01964 320 MobiDBLite consensus disorder prediction 136 165 - -
Gma12g01964 320 MobiDBLite consensus disorder prediction 294 320 - -
Gma12g01964 320 Gene3D - 190 261 - -
Gma12g01964 320 MobiDBLite consensus disorder prediction 13 43 - -
Gma12g01964 320 SMART brlzneu 187 251 IPR004827 GO:0003700|GO:0006355
Gma12g01964 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 241 IPR004827 GO:0003700|GO:0006355
Gma12g01964 320 SUPERFAMILY Leucine zipper domain 191 245 IPR046347 GO:0003700|GO:0006355
Gma12g01964 320 Coils Coil 153 173 - -
Gma12g01964 320 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 320 - -
Gma12g01964 320 CDD bZIP_plant_RF2 192 242 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01964 Gma-Chr12 40237949 40241097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01964 1 268 bZIP Transcription Factor Family AT3G58120 57.627 9.25e-100 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g01964 bZIP_2 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01964 - - gmx:100101874 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01964 12 40237949 40241097 Gma12g01964 12 40237949 40241097 ECH
Gma13g02591 13 40764000 40767209 Gma12g01964 12 40237949 40241097 GST