Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01941 ATGAGCAGTGTCTGTGCCAAGCAGCACAAGTTTTACCCCTCTCACCAACTCCTTTCTCCAAAGAAAACCCTCAGAGAAATTGACATCCCTCCAAGGAAGCTCCTCACTCGCCGTGCCGCCGCATGCGTCGGCGGCACCGACGTGTACTCCTCCGAGGAGACCATGCTGCAAAAGTTCCTCCCTTCCAACGATTCTGACGAGGACGACCCTTACTCCTCAGACCACTTCCGGATGTTCGAGTTCAAGGTCCGCCGGTGCACCCGAAGCCGGAGCCACGACTGGACCGACTGCCCCTTCGCCCATCCGGGTGAAAAGGCACGCCGCCGTGACCCACGGCGGTACAGAACGGAGGCCTGTAAGGATGGCAGGAACTGCAAGAGAAAGGTGTGTTTTTTCGCACACACCCCTCGCCAGCTGAGAATTTTGCCGGTAACAACATCTTCACCCTCTTCAAATGACATGCCATGCAAGAAGAACCTTAACAAACTCTTAAACCATGCTTCAAAATCAAACAACAACAACAACAACAACTGTTGTTTGTTTTGCCATTGTGGTGCTTCCTCTTCAGTTTCTCCAACCTCCACACTCTTCGGCATGTCGCATTTCTCGCCACCAGTATCACCATCCTCGTCCTCTTCACCACCTCCTTCTCCATTGAAACCCCGAAGCGTGGTTTCTCCTATTTCTCCAATTTCCCGTTACAGTGCTGTGAATATGAACCCTCATCACGGGGTGGTGAGTTACAAAGACATGTTCGCTGAGTTGGTGAATTCTTTGGAGGGTTTGAGTTTCAACGAGGGTTCTCCTGTTTCTGGTGCTAAAGCACCGAACTTTCCTTGGCTTGATGTTTCTCTTGAGGAACAGCAACAACAACAAAATCCTTTCATTGTTTCTTCTTTTGGCTGCGAAGATAAACAGAACCAGTTTATTTTTTCACCACCGTCCATTCAGACACCGACAAATGGGAAGTTCTGTCGCAACAGATTCATGGGCAACGACAACAAGGTTGTCGGTGGTGCTGACGTTAATGGCCCAGATCTCGCGTGGGTGAACGAGTTGCTGATGTAA 1068 0.5037 MSSVCAKQHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAACVGGTDVYSSEETMLQKFLPSNDSDEDDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYRTEACKDGRNCKRKVCFFAHTPRQLRILPVTTSSPSSNDMPCKKNLNKLLNHASKSNNNNNNNCCLFCHCGASSSVSPTSTLFGMSHFSPPVSPSSSSSPPPSPLKPRSVVSPISPISRYSAVNMNPHHGVVSYKDMFAELVNSLEGLSFNEGSPVSGAKAPNFPWLDVSLEEQQQQQNPFIVSSFGCEDKQNQFIFSPPSIQTPTNGKFCRNRFMGNDNKVVGGADVNGPDLAWVNELLM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01941 355 MobiDBLite consensus disorder prediction 208 223 - -
Gma12g01941 355 Gene3D - 79 142 - -
Gma12g01941 355 PANTHER UNKEMPT FAMILY MEMBER 111 354 IPR045234 -
Gma12g01941 355 PANTHER UNKEMPT FAMILY MEMBER 26 114 IPR045234 -
Gma12g01941 355 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 111 354 - -
Gma12g01941 355 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 26 114 - -
Gma12g01941 355 MobiDBLite consensus disorder prediction 202 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01941 Gma-Chr12 40059716 40060894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01941 45 219 C2H2 Transcription Factor Family AT5G12850 33.784 1.44e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01941 K23047 - gmx:100787049 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01941 12 40059716 40060894 Gma12g01941 12 40059716 40060894 ECH
Gma13g02614 13 40943733 40944908 Gma12g01941 12 40059716 40060894 GST