Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01931 ATGAAGCAGTCTCTTCTGCTGAGAGGCGAAAGCAGTGACCAGAGTTACCAGTCGCGGGGAATATTCCGGCGCTCCGATGCTATCGCCTACGGCTCCAACTACGAGAAAGCCGCTGCGTTCATCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGGAAATTCTCGACTCACCAAACTTCCAAAATTACATAAGATTTTATTTTATATTCACTAAATGCAATCTAATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAGCCTCTATGGTGTAAAAAGCTTACCACAAATTCCTGCAACGATAGAGAGTATTTCTTTTTGGGACAATTGCCATATCTAACTGATGCAGAATGTCTTATTTATGAGGGAATAACTCTTGTTTTGCTAATCATACATACGTTCTTCCCATTGTCATACGAAGGATCCCGCATATATTGGAAAAATACTATTAATCAATTGAAGGTTTTCTCTCTATTAGTGCTAGTTGCTGATGTGATGCTCTATGCCCTTTTCTTGTCTCCACTGGCTTTTGATTTTCTACCTTTTAGAATTGCACCTTATATCAGAGTTGTTCTTTTCGTTCTGAATATTAGGGAGCTACGAGAAACCATCATTATCTTGGTTGGGATGCTTGACACATACTTAAATGTCTTGGCTTTGTGGCTTCTGTTTCTTCTTTTTGCTAGCTGGGTGGCGTATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACATTGTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCACGTTGGTATTGCCTGTTTTTCATACTATTTGTGCTGGTGGGGGTTTACTTTGTTACAAACTTAATCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTCGTAAAACAAGTTTTTGAGAAGGATTGTTTGAGAAGGAATGTGTTGGACAAAGCTTTTGATCTCTTGGATACGCATAAAGTTAGTAGTCTCAACAAAAATCAATGCATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAAAATCTCCAGGGAAGACTTTGAATTGATATTTGATGAGCTGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCGGATATTTGCAATGCCATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAGTATTTATCATTCTACCATTCACCCAGCTCAAAGAGATTAAAAGAATTCGTGAGGAGTCCTATGTTTGGATACCTAGTGTCCTTTGTTCTCGTACTAAATCTGGTGGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGTGTGGCAAATGGTTGAGTTCGTTTTCGGGTGGGTATATGTAATAGAAATGGTTTTAAAGATTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAACCGCTTTGATTTTATTGTCACGGTGACAATTGCCATTGGAGAAACTGTAACTTTTGCTGTACCTGATGATGATCTTCCTTTCATCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTAATAAGGATCCTAATGTATGTCAAGCGATACCGAGCCTTTGTGGCAACTTTATTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTACCTTGTGTATTTATTGTTCAATTGGAGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCGAATTGGAATTAACAGCTCTTGCTGAAAATGACTATTTGGTTTTCAATTTCAATGATTACCCGAATGGAATTGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGGGACGAAGTAATGACAAGCTACAAGGAATTAACTGGGACTTCTTGGACCTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTAAACTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGAACTTGAGTCATCAGAAACTTGTGAAGGAAATGACAAGGAAGTTGAAGGAGATAAATATCGAAAGCGGTCTATTGGCACAAAAACACGAAGCCAGAGGGTTGATGCTCTTCTTCATCATATGTTGAGTGCTGAATTGTGTCAAAATGAGTCTTCCAGTACACAAACTTCATAA 2220 0.382 MKQSLLLRGESSDQSYQSRGIFRRSDAIAYGSNYEKAAAFIDLAEDGVGLPEEILDSPNFQNYIRFYFIFTKCNLIWSLSYFALIVLNFLEKPLWCKKLTTNSCNDREYFFLGQLPYLTDAECLIYEGITLVLLIIHTFFPLSYEGSRIYWKNTINQLKVFSLLVLVADVMLYALFLSPLAFDFLPFRIAPYIRVVLFVLNIRELRETIIILVGMLDTYLNVLALWLLFLLFASWVAYVFFEDTIQGKTVFTSYGTTLYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDCLRRNVLDKAFDLLDTHKVSSLNKNQCIRLFEELNKYRTLPKISREDFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLSFYHSPSSKRLKEFVRSPMFGYLVSFVLVLNLVAVIIETTLDIENNSAQKVWQMVEFVFGWVYVIEMVLKIYAYGFENYWRDGQNRFDFIVTVTIAIGETVTFAVPDDDLPFISNGEWIRYLLLARMLRLIRILMYVKRYRAFVATLLTLIPSLMPYLGIIFCTLCIYCSIGVQIFGGIVNAGNPELELTALAENDYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMELESSETCEGNDKEVEGDKYRKRSIGTKTRSQRVDALLHHMLSAELCQNESSSTQTS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01931 739 Gene3D - 204 316 - -
Gma12g01931 739 Pfam Ion transport protein 132 313 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma12g01931 739 Pfam Ion transport protein 432 679 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma12g01931 739 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 734 IPR044581 GO:0005245
Gma12g01931 739 SUPERFAMILY EF-hand 325 396 IPR011992 -
Gma12g01931 739 Gene3D - 423 557 IPR027359 -
Gma12g01931 739 Gene3D - 321 398 - -
Gma12g01931 739 Gene3D - 558 717 - -
Gma12g01931 739 SUPERFAMILY Voltage-gated potassium channels 431 678 - -
Gma12g01931 739 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01931 Gma-Chr12 39930627 39955921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01931 23 738 Ion Channels AT4G03560 66.527 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01931 K16900 - gmx:100819307 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01931 12 39930627 39955921 Gma12g01931 12 39930627 39955921 ECH