Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01910 ATGGGCTGTTGTGTCTCAACAAGCAGTCAGAGTACTTGTAGTAGCAGGAGCAATGGAGACACGATCGCTCCAACCTGTCTAGAGATTGGATTCTGTGGTCAAAAGAGTGCAAGGAGAACATCCTCTGATCATGTTGTGTCTCTGCATCAATTACCCTCATTACCAAACAGAATTTTCACCAATGGAAAGAGCAGGTCTTCTTGCATATTTACGCAGCAGGGTCGGAAGGGTATTAATCAGGACGCCATGATTGTGTGGGAAGATTTCATGCCCGAAGATGTAACCTTTTGTGGTGTCTTTGATGGTCATGGTCCACACGGTCACCTTGTCGCATGCAAAGTCAGGGAAGCCTTGCCGCTGAAACTTCTTTCATTTTTGCATTCCTCCGAATCAGGGCAAAATGGTTCAGGTAAAGCTTGTTTTAGGGGCAACATAAAGCCTGAAAGTGGAGAATCTGAGAAAGATTTGTCTGCTGAAGATAACGAAAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGTTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGAAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCAAAGGACAGCAACCACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAACCTGATTTGCCAAGGGAAGCAGAAAGAATCAAACGGTGCAAGGGTAGGGTATTTGCGTTAGAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATATGGTGTGATTTCTATACCTGAATTTTCTCATCGGCTGCTAACAGACAAAGATCAATTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTTGGGATAGTATCTTCAGCGCCAACTCGATCATCAGCAGCGAGGATTCTGGTGGATTCCGCGGCCCTAGAGTGGAAACTCAAATATCCTACTTCAAAAATGGATGACTGTGCAGTTGTGTGCCTATTTTTGGATGGAAAAATGGACTCAGAATCTGATTGTGATGAGCCATGCTTCTCTTCTGCAACCATCCAGAGCAACCATTCAGAAAATCCGGTTGAGTCAGATGACGGTCAAAAGCCTGAGCCATCTTTGCGAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAAACCTGTGGAGGAGGAGTTGGAGGGGTATTTGTTGATGTTGACGATGGAACATCCGCAGCCGAAGATCAAAACTGGTCAGGTCTGGAGGGTGTCACGCGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1425 0.4477 MGCCVSTSSQSTCSSRSNGDTIAPTCLEIGFCGQKSARRTSSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLVACKVREALPLKLLSFLHSSESGQNGSGKACFRGNIKPESGESEKDLSAEDNENSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNHSMVAIQLTIDLKPDLPREAERIKRCKGRVFALEDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVGIVSSAPTRSSAARILVDSAALEWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEPCFSSATIQSNHSENPVESDDGQKPEPSLRRNFTVRSSEENETCGGGVGGVFVDVDDGTSAAEDQNWSGLEGVTRVNSLVQLPRFSEERPNS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01910 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
Gma12g01910 474 SMART PP2C_4 55 368 IPR001932 -
Gma12g01910 474 MobiDBLite consensus disorder prediction 147 161 - -
Gma12g01910 474 Gene3D - 57 378 IPR036457 -
Gma12g01910 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gma12g01910 474 MobiDBLite consensus disorder prediction 137 161 - -
Gma12g01910 474 CDD PP2Cc 65 370 IPR001932 -
Gma12g01910 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Gma12g01910 474 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Gma12g01910 474 MobiDBLite consensus disorder prediction 389 411 - -
Gma12g01910 474 Pfam Protein phosphatase 2C 153 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01910 Gma-Chr12 39731100 39734195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01910 1 474 PP2C-type Phosphatase Gene Family AT1G03590 67.782 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01910 - - gmx:100777448 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01910 12 39731100 39734195 Gma12g01910 12 39731100 39734195 ECH
Gma13g02650 13 41243812 41246423 Gma12g01910 12 39731100 39734195 GST
Gma12g01910 12 39731100 39734195 Gma12g00975 12 10459938 10468563 PCT
Gma12g01910 12 39731100 39734195 Gma06g02648 06 49973748 49979416 PCT
Gma12g00975 12 10459938 10468563 Gma12g01910 12 39731100 39734195 PCT
Gma06g02648 06 49973748 49979416 Gma12g01910 12 39731100 39734195 PCT