Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01903 ATGACCACCTCTCGTCCAAACCTCCATGATGGCCACCGCATCTCGCCTCCACCCAACACCACCACTGCAACCACCAAACGCCACCTAATTGCACCAAACTCACCATTGCATTGTCACCCACCACTGCCACATATTTCTCAATTTGTAATGGACACCACTTTATGCTTCAGCAGTACCACTGCCTCCAAAAAACTCATCACCAACAATCCTTATCTCATTGTCTACGTTGTCAATACCATTGTGACATGTTCCCACATGATCTTGATCTTACAAAACCCGACATGGAATGAGCATTTCAAGATTCCCTTCACACACTTGGCACTACAGGTTGAGTTCTACATCAAGGACAATGACATGTTTGGTGTCGACCTTATCAAAGTTGCCACTATCCCAATCAAATGGATCCACGCAAGTGCTAGTCGAATTGAAGAGGAAGATGGAGAGAAAAAGAGAGTGAGTGGGAGTGTAAGATTGAGACTTTACAAATTTTGCATGTGA 498 0.4458 MTTSRPNLHDGHRISPPPNTTTATTKRHLIAPNSPLHCHPPLPHISQFVMDTTLCFSSTTASKKLITNNPYLIVYVVNTIVTCSHMILILQNPTWNEHFKIPFTHLALQVEFYIKDNDMFGVDLIKVATIPIKWIHASASRIEEEDGEKKRVSGSVRLRLYKFCM 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01903 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 69 161 IPR035892 -
Gma12g01903 165 PANTHER PHOSPHOLIPASE D 36 142 IPR015679 -
Gma12g01903 165 PANTHER PHOSPHOLIPASE D 36 142 - -
Gma12g01903 165 Gene3D C2 domain 55 162 IPR035892 -
Gma12g01903 165 MobiDBLite consensus disorder prediction 1 23 - -
Gma12g01903 165 Pfam C2 domain 67 135 IPR000008 -
Gma12g01903 165 ProSiteProfiles C2 domain profile. 39 146 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01903 Gma-Chr12 39659322 39659961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01903 64 143 Phospholipase D Gene Family (Wang group) AT4G00240 38.750 1.11e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01903 K01115 - gmx:100795859 85.8853