Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01888 ATGCATGAAGAAGACACGTTCATTTTCCCAATTGTGGCCTTGCAAGTCACGGTTTTTCCCAACAATGGCCTTTGCATAGCTATCACTTATTGCCACGTGATGGATGATAGGTGTTGCGGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGCGGTGGAGTTGACTTGACCCTTGTGGAGAAGTCACCACCTTGCTTTGATAGGAAAATATTGAAGGACCCCAAAGGATCACTCGAGGCTATTTTCTTGAGAGATTACTTTCAAGAGAGGTCAACTTGGAAGGACAAACTCATTGGTCAAACTCCTAAACACGTGTGTGATGATGAGGACTTTCTTAAGGCAACTATTGCTTTTGGAAGAGATGATATTGAGAGCCTCAAAAGATATGTGCTGAATCATTGGAAAAAAAATGCTGAACTCAAAGCGCCACAATATCTATCAAAATTTGTGGTAACGTGTGCTTTCGTGTGGGTTAGCTTGGTTAAAGCAAAATATAGAGATGATGATGAAGGGGAAGAGATGAAAGAGGAGTACTTTCGTTTTGCAGCAGATTGTAGAGATCGCTTGGATTACCCTATACCAGAAACGTACTTCGGAAATTGCTTAACGAGATGTTATGCAGTGCTCAAGCGGAAGGAGCTAAAGGGAGAAGGTGGTTTTGTGAACGCAGTGAAGGCCATTGCAAGAGCAATAACTGATATGAAAACTGAACCTCTTAGAGGTGCTGAAAACTGGAGGGCATTATTTAGGAAGATGTTTGTATTGGGAAGTACTGTGCTAGTTACAGGGTCACCTAAGTTCAGTGTTTATGAGACTGACTTTGGATTTGGAAGACCTACCAAAGTGGAGATGGTACATTCCCCTAAGTGTATGTCTGTTGCCGAAAGTGGAGACAAAGAAGGAGGATTAGAGCTTGGCTTGGTATTTAGAAGTGGGGAATTTGAGTATTTCATTTCTGTCATTGAGCAAGGATTTGTAGCATTAAAATCCTAA 996 0.4157 MHEEDTFIFPIVALQVTVFPNNGLCIAITYCHVMDDRCCGHFMKSWSSICRSGGVDLTLVEKSPPCFDRKILKDPKGSLEAIFLRDYFQERSTWKDKLIGQTPKHVCDDEDFLKATIAFGRDDIESLKRYVLNHWKKNAELKAPQYLSKFVVTCAFVWVSLVKAKYRDDDEGEEMKEEYFRFAADCRDRLDYPIPETYFGNCLTRCYAVLKRKELKGEGGFVNAVKAIARAITDMKTEPLRGAENWRALFRKMFVLGSTVLVTGSPKFSVYETDFGFGRPTKVEMVHSPKCMSVAESGDKEGGLELGLVFRSGEFEYFISVIEQGFVALKS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01888 331 Gene3D - 109 327 IPR023213 -
Gma12g01888 331 Pfam Transferase family 9 318 - -
Gma12g01888 331 PANTHER - 3 331 - -
Gma12g01888 331 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 331 - -
Gma12g01888 331 Gene3D - 2 98 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01888 Gma-Chr12 39543661 39544936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01888 2 318 Monolignol Biosynthesis Gene Families AT5G48930 25.455 2.75e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01888 - - gmx:100813271 686.026