Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01886 ATGGCAGTGCCAAGAGCGCACAAGCTTGTTGAGAAATCTGAGGTTGCTCCAGCAACAACGAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTCTAGCAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCACTTTGCACACCCCACACACCATTTCTGTCAAACCACACTCCCCACTCTCAAACActcactctctctcactctctctcactTTTTTCCTCTCGCTGGCAACCTCCTCTGTCCTTCACCACCCCACAAACCCTTCATTCGCAACACCAATGATGACACTGTCACCTTAACAGTCATTGAATCCGAAGCTGATTTCAAGCTCCTCTCATCCAACCACCCCAAGAGTCTCAAAGAATTAGATCACTTGGTTCCAGAGTTGAGTTTCTCATTCTCAACCATGCATGATGACACGTTCATTTTCCCTATAATGGCATTGCAAGCCACGGTTTTCCCAAACCATGGCCTTTGCATCGCCATCACGTACTGTCATGCGATTGATGGTAAAAGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGACTTTACTCTTTTGGAAAAGTCACCACCTTGCTTTGATAGGGAAGTGTTGAAGGACCCCAGAGGACTCGAGGCCATTTTCTTAAGACAGTATTTTGAAGAGAGAACAACTTGGAAGGGCAAACTCGGTGGAAGAAAAGATGATAGCGATGAAGACTTTGTTAAGGCAACTATTGTTTTTGGAAAAGATGATACTGAGGGCTTAAAAAGATGGGCACTGACTCAATGGAAGAAAAACAACGAGTTCAACTCGCCCCAAAATCTGTCAAAGTTTGTGGTGACGTGTGCTTTTGTGTGGGCTAGTTTGGTTAAAACAAGATGCAGAAACTATGATGATGAAGAAGAAGATGTCAAAGAGGAGTACTTTCGTTTCGCTGCTGATTGCAGAGATCGCCTTGGGTACCCTATACCAGAAACTTACTTTGGAAACTGCTTAACGCTATGTTATGCAATACTTAAGAGAAAAGACCTCAAGGGAGAAAGTGGTTTTGTGAATGCGGCCAAGGTAATTGAAAAGTCAGTGAGTGATATGAAAATTGATCCTTTTAAAGATGCGGAACATTGGAGGGAGTTGTTTTTGAAGATGTTTGTGTTGGGAAGTGCACTGCTGGTTACAGGGTCACCCAAGCTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGTACATCCCTTCAATTGTATGTCTCTGGCTGAAAGTGAAGATGAGGAAGGAGGACTCGAGGTTGGCTTGGTGTGTAGAAGTACAGAGTTTGAAGATTTAAATTCTGTCATTCAACAAGGACTTAAAACTTCAAAATCCTAA 1401 0.4247 MAVPRAHKLVEKSEVAPATTRTTSSLPLSFLDLPLAGPIYVRRQFFYHFAHPTHHFCQTTLPTLKHSLSLTLSHFFPLAGNLLCPSPPHKPFIRNTNDDTVTLTVIESEADFKLLSSNHPKSLKELDHLVPELSFSFSTMHDDTFIFPIMALQATVFPNHGLCIAITYCHAIDGKSCSHFMKSWSSICRSGGVDFTLLEKSPPCFDREVLKDPRGLEAIFLRQYFEERTTWKGKLGGRKDDSDEDFVKATIVFGKDDTEGLKRWALTQWKKNNEFNSPQNLSKFVVTCAFVWASLVKTRCRNYDDEEEDVKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAILKRKDLKGESGFVNAAKVIEKSVSDMKIDPFKDAEHWRELFLKMFVLGSALLVTGSPKLTVYETDFGFGRPTKVEMVHPFNCMSLAESEDEEGGLEVGLVCRSTEFEDLNSVIQQGLKTSKS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01886 466 Gene3D - 7 234 IPR023213 -
Gma12g01886 466 Gene3D - 243 464 IPR023213 -
Gma12g01886 466 PANTHER - 1 466 - -
Gma12g01886 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 466 - -
Gma12g01886 466 Pfam Transferase family 11 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01886 Gma-Chr12 39524546 39526133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01886 11 447 Monolignol Biosynthesis Gene Families AT5G48930 24.289 3.28e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01886 - - gmx:100811986 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01886 12 39524546 39526133 Gma12g01886 12 39524546 39526133 ECH
Gma13g02674 13 41442974 41444680 Gma12g01886 12 39524546 39526133 GST