Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01880 ATGACGCGTGGTGGTAAACCGGGGTCATTGAATCACAACATCGGTTTTATGACCGTCTTTGAAGGGCGGCTTTTCTACATCGGTTGTATAGCTACAACCGATGTAGAATGGGTAGGTCTCTATAGCGGTTCTAAGGCTGAAAATGATGTTGAATGGAGGAAATGTGATCTTAAGCATCCCCCTGGTGATGAAATATACAGAAGTGGTACACTGTCAATGTTTGAGGTCGATGGCAAAAAGAACAAGGTTTATGGGCAGAACTTTTGTTATTTGGCTAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGTCTCCAAGATAAAATATTGCAGTGTTGTCATTATTTTGCTTTGACATGA 411 0.4015 MTRGGKPGSLNHNIGFMTVFEGRLFYIGCIATTDVEWVGLYSGSKAENDVEWRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNFCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCLQDKILQCCHYFALT 136
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01880 136 PANTHER HISTONE ACETYLTRANSFERASE 52 121 - -
Gma12g01880 136 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 52 121 - -
Gma12g01880 136 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 36 121 IPR016181 -
Gma12g01880 136 Pfam MOZ/SAS family 60 121 IPR002717 GO:0004402|GO:0006355|GO:0016573
Gma12g01880 136 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 1 136 IPR002717 GO:0004402|GO:0006355|GO:0016573
Gma12g01880 136 Gene3D - 57 135 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma12g01880 Gma-Chr12 39468274 39470847 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01880 53 121 C2H2 Transcription Factor Family AT5G64610 94.203 1.03e-42 144
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01880 K11308 - gmx:121173169 154.836