Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01861 ATGGTGAAAGAAGAAACAACTTTTGGAAAAAACAATTTCGTGGTTGCAATCTTCGGACTTCTCTTGCGTCGGAAAAACCACGTGATTGTGTTATCGACGGGTGCGGTTTCTGTTCTTGTTAATACGTTAGCTTCTCCGGGTAATGCTAATCTTGTAACTGATTCCTTGGACATTCTAGTGGCATTGGTGGAGAGTGTGGAAGGGGCTTATGCACTGTTACGAGTTGAGGCGTTGCCTTTGGTGGCTAAGATTTTGCAATCTGCTACTTCGCGCTCAGGGGAGGAGTAA 288 0.4514 MVKEETTFGKNNFVVAIFGLLLRRKNHVIVLSTGAVSVLVNTLASPGNANLVTDSLDILVALVESVEGAYALLRVEALPLVAKILQSATSRSGEE 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01861 95 Coils Coil 91 95 - -
Gma12g01861 95 Gene3D - 10 94 IPR011989 -
Gma12g01861 95 PANTHER U BOX DOMAIN-CONTAINING 1 95 - -
Gma12g01861 95 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 18 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01861 Gma-Chr12 39250567 39250854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01861 10 88 U-box Gene Family AT1G10560 36.250 1.15e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01861 - - gmx:100810963 158.303