Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01853 ATGGACCAAGTGAACGGTCTAGCCTTGTGTCGCGGTGACGTCAACGCCACAAACTGCATGGCTTGTGTCAATGAAGCAACCAAAAAGCTTCAAGAGAGGTGCTCAAAGAAGAAGGGGGCAATAGTATGGTACGATTACTGCCTTCTCAAGTACTCAAATGAATACTTCTTTGGTGAAATTGATGAGAAGAACAAGTTCTATATGGTTAACATATACGACGTGGATGACCCCTCTACTTTCAGTGATAAAGTCAATGAGTTGCTAAGTGGTTTGTCTTATAATGCTTCTCAAACTCCCATGTTGTATGCCGTAGGGGAATTGCAACTCCAAGAGTCAAAAACGTTGTACGGTTTGGCTCAGTGTACAAGGGACCTCCTTGGCCCTGGTTGTAAGAAGTGTCTTGATGATGCTATTAGTGATCTTCCAAATTGTTGTGACGGAAAGCAAGGTGCACGGGTTGTGGGTGGGAGCTGCTATGTTAGATATGAACTATACCCTATTGTTGAGGACCCCTAG 516 0.4419 MDQVNGLALCRGDVNATNCMACVNEATKKLQERCSKKKGAIVWYDYCLLKYSNEYFFGEIDEKNKFYMVNIYDVDDPSTFSDKVNELLSGLSYNASQTPMLYAVGELQLQESKTLYGLAQCTRDLLGPGCKKCLDDAISDLPNCCDGKQGARVVGGSCYVRYELYPIVEDP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01853 171 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 2 168 - -
Gma12g01853 171 ProSiteProfiles Gnk2-homologous domain profile. 62 167 IPR002902 -
Gma12g01853 171 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 2 168 - -
Gma12g01853 171 Gene3D - 63 166 IPR038408 -
Gma12g01853 171 Gene3D - 1 56 IPR038408 -
Gma12g01853 171 Pfam Salt stress response/antifungal 2 53 IPR002902 -
Gma12g01853 171 Pfam Salt stress response/antifungal 75 165 IPR002902 -
Gma12g01853 171 ProSiteProfiles Gnk2-homologous domain profile. 1 56 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01853 Gma-Chr12 39174313 39175173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01853 10 170 Pollen Coat Proteome AT4G20670 41.667 1.15e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01853 - - gmx:100803995 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01853 12 39174313 39175173 Gma12g01853 12 39174313 39175173 ECH
Gma13g02706 13 41719763 41720651 Gma12g01853 12 39174313 39175173 GST