Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01852 ATGTCTTCCAAGCCCTTCACCACTTTTCGCTTGATCACGTTGACCCTACCTCTCCTTCTCCAAACATCTTTTGAACTCATTTACAATCCCTATTCTTCAGGTTTTGTGGCAGCCTCAATGGGTCATTTCGAGGACCAGAGAACCTACGACCTTGCTCTTTGCCGCGGCGACAACGTGTTGGCCTCAGAATGCAAAACCTATGTCTCTGATGCAACCAAAGAAATCCGCAATCGCTGCCCTTACAACAAAGGTGCCACCATATGGTATGACTACTACATGTTCAAGTACTTGGACACTACTGATTTCACCGGCAAGGTTGACAACACAATCAAGATCTATATGTGGAACGTGAACAGCGTGAGTAGGGACCCTCCAACTTTTAACTCTAATATTAGAGAAATTACCACCAAATCGCAAAATTACCTCCGGTTAAACCTCTTTGGCGACAACAACGCCTCGGGATCCCCGCACCTCAGCCGGCTTGACGAGAACGCCGTCGTGGATGCCACCCCCGACGACTACAGAAACATCGGACTTGCTATCGACTTGCTCTGCCGCAACGAGCTCCCCCTGCTATTGTACCTCACGCTCGACTCCGACAACGGGAAAAAACCCCTCCTCCAGAAGAATAGTGACTTCATCCCTCTATAA 651 0.4885 MSSKPFTTFRLITLTLPLLLQTSFELIYNPYSSGFVAASMGHFEDQRTYDLALCRGDNVLASECKTYVSDATKEIRNRCPYNKGATIWYDYYMFKYLDTTDFTGKVDNTIKIYMWNVNSVSRDPPTFNSNIREITTKSQNYLRLNLFGDNNASGSPHLSRLDENAVVDATPDDYRNIGLAIDLLCRNELPLLLYLTLDSDNGKKPLLQKNSDFIPL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01852 216 Pfam Salt stress response/antifungal 34 96 IPR002902 -
Gma12g01852 216 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 25 139 - -
Gma12g01852 216 Gene3D - 16 100 IPR038408 -
Gma12g01852 216 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Gma12g01852 216 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 25 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01852 Gma-Chr12 39169755 39170655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01852 39 172 Pollen Coat Proteome AT4G20670 30.921 8.05e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01852 - - gmx:100527155 142.895