Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01851 ATGATAAAGACCCCTTCAACGGGTTTTGGTGTTGGCTCTGCAGGCCAACACCAAAACCAAAAGGCATATGGGCTTGCCCTTTGCCGTGGCGACGTGTTGGCTGCAGAATGCAAAACTTGTGTCTCTGAGGCACCCAAAGAAATCCTCAGTCGCTGTCCCTACAACAAAGGTGGCATCATTTGGTACGACTATTGCATGTTCAGGTACTTGGACACTGATTTCCTTGGCAAAATTGACAACACAAACAAGTTCTACATGTGGAACTTGAAAAATGTGAGTGACCCTGCAACGTTTAATTATAAGACTAGAGAGTTGTTGAGCCAGCTTGCTCAGAAAACTTATGTGATGAATAATAAATTGTATGCAACTGGAGAGGTAAAGCTTGAGAATTCAGAGACACTTTATGGGTTGACTCAGTGCACTAGAGATCTTTCTAGCAGTGATTGCAAGAAGTGTCTTGATGATGCAATCAATGAACTCCCAAATTGTTGTGATGACAAAGAAGGAGGTAGAGTTGTGAGTGGAAGCTGCAACTTCCGTTATGAGATATACTTCTTTGTTAAGGAGTAA 570 0.4246 MIKTPSTGFGVGSAGQHQNQKAYGLALCRGDVLAAECKTCVSEAPKEILSRCPYNKGGIIWYDYCMFRYLDTDFLGKIDNTNKFYMWNLKNVSDPATFNYKTRELLSQLAQKTYVMNNKLYATGEVKLENSETLYGLTQCTRDLSSSDCKKCLDDAINELPNCCDDKEGGRVVSGSCNFRYEIYFFVKE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01851 189 ProSiteProfiles Gnk2-homologous domain profile. 1 74 IPR002902 -
Gma12g01851 189 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 2 188 - -
Gma12g01851 189 Pfam Salt stress response/antifungal 91 183 IPR002902 -
Gma12g01851 189 Pfam Salt stress response/antifungal 9 69 IPR002902 -
Gma12g01851 189 Gene3D - 79 186 IPR038408 -
Gma12g01851 189 Gene3D - 2 74 IPR038408 -
Gma12g01851 189 ProSiteProfiles Gnk2-homologous domain profile. 80 186 IPR002902 -
Gma12g01851 189 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 2 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01851 Gma-Chr12 39165498 39166409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01851 8 188 Pollen Coat Proteome AT4G20670 40.642 2.25e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01851 - - gmx:100527155 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01851 12 39165498 39166409 Gma12g01851 12 39165498 39166409 ECH
Gma13g02707 13 41724061 41725008 Gma12g01851 12 39165498 39166409 GST