Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01850 ATGTGCAAAGGTGCAGAAGGAGAAAAGCAACATGGTTTCTGCAGCAGCTTTCTACATAAAGAGAGTGCAACCAGAAGTGCTATATGTTGTGAGCTATGTGGGTTACAGGCTTCATTGTATTGCCAAGCTGATGATGCCTACTTGTGTAAAAAATGCGATAAACGGGTTCATGAAGCTAATTTTTTGGCCCTTAGGCACATTAGAAGATCTTTTGTAATAGAAAAGCCAATTCCAAAGCAGGAGAACGAATTTCTGGCAGAAGTTATACTATGTTAG 276 0.3986 MCKGAEGEKQHGFCSSFLHKESATRSAICCELCGLQASLYCQADDAYLCKKCDKRVHEANFLALRHIRRSFVIEKPIPKQENEFLAEVILC 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01850 91 Pfam B-box zinc finger 28 66 IPR000315 GO:0008270
Gma12g01850 91 PANTHER B-BOX DOMAIN PROTEIN 30-RELATED 29 71 - -
Gma12g01850 91 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 29 71 - -
Gma12g01850 91 SMART bboxneu5 25 71 IPR000315 GO:0008270
Gma12g01850 91 ProSiteProfiles Zinc finger B-box type profile. 24 71 IPR000315 GO:0008270
Gma12g01850 91 CDD Bbox1_BBX-like 29 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01850 1 69 C2C2-CO-like Transcription Factor Family AT3G21890 46.575 3.29e-16 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma12g01850 zf-B_box 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01850 - - gmx:100305571 149.443