Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01844 ATGAAAATGGGAAGCAACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCATCTCATGCTCAACTTCAGCTTGGTTTTTATGCCAAGAGTTGCCCAAAAGCTGAGCAAATCATTTTGAAATTTGTTCATGAACATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCACTTCCATGACTGTTTTGTAAGGGGATGTGATGGATCGGTGCTTCTGAACTCAACAACCAATCAGGCTGAAAAGAATGCTCCTCCAAATCTCACAGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACCTTGGCTTCCAGAGATTCAATTGTAGCCACAGGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCTGCTCCATTTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTGTCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCATCATTAGACAGTGAATATGCTGCAAATCTGAAAACCTTCAAGTGCAAGGACCTCAATAAGTTGAACACCACCAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTGTTGACTAATTCAGTTACAAAGGCTCAAATCATTGAATTGCTTGAAGGGTCAGTTGAAAAATTCTTTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAAGGTGAAGACAGGGACAGAGGGAGAGATCAGAAAGCATTGTGCATTTGTTAATAGCTAA 981 0.4251 MKMGSNFRFLSLCLLALIASSHAQLQLGFYAKSCPKAEQIILKFVHEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLASRDSIVATGGPYWKVPTGRRDGVISNLVEARNNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKTFKCKDLNKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIELLEGSVEKFFAEFATSIEKMGRIKVKTGTEGEIRKHCAFVNS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01844 326 PANTHER PEROXIDASE 4 325 - -
Gma12g01844 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 Gene3D Peroxidase, domain 2 160 304 - -
Gma12g01844 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gma12g01844 326 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gma12g01844 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Gma12g01844 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 Gene3D - 28 325 - -
Gma12g01844 326 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PANTHER PEROXIDASE 25-RELATED 4 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g01844 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01844 Gma-Chr12 39115418 39117696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01844 12 325 Peroxidase AT4G11290 69.620 2.09e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01844 K00430 - gmx:100803114 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01844 12 39115418 39117696 Gma12g01844 12 39115418 39117696 ECH
Gma13g02718 13 41793882 41795396 Gma12g01844 12 39115418 39117696 GST
Gma12g01844 12 39115418 39117696 Gma12g00902 12 9065042 9067576 PCT
Gma12g01844 12 39115418 39117696 Gma06g02701 06 50675851 50678406 PCT
Gma12g00902 12 9065042 9067576 Gma12g01844 12 39115418 39117696 PCT
Gma06g02701 06 50675851 50678406 Gma12g01844 12 39115418 39117696 PCT