Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01841 ATGGCTGACTCGGATCGCTCTTCTAGTGAAGTTTCTACACATTCTACTGATTCAGGGAAGCGAGGGTCTTCCAAAGTTGAATTTTCTGAAGATGAGGAAACTCTTATCATCAGGATGTATAAACTGGTAGGGGAGAGGTGGTCTTTAATTGCTGGAAGGATTCCTGGAAGAACAGCAGAGGAAATAGAGAAGTATTGGACTTCAAGATTCTCAGGGCGATCTGAGTGGATGAGATGTGAAACTTCGCAGCTGATCACCATCGCCTTCTTCCTCCCCTTGTTTCTAACCAATCTTCAAATTCCATGTTTTTTTAGTTTGGAGAGCATCGTTACCCTGTCTCACATGATCAGTTGCGTTTGTCACCTGTTCATTACAGAATGCCATTTTAAAAAGACAAGATGGTTAGTTGTCTGA 414 0.4227 MADSDRSSSEVSTHSTDSGKRGSSKVEFSEDEETLIIRMYKLVGERWSLIAGRIPGRTAEEIEKYWTSRFSGRSEWMRCETSQLITIAFFLPLFLTNLQIPCFFSLESIVTLSHMISCVCHLFITECHFKKTRWLVV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01841 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 74 IPR017930 -
Gma12g01841 137 MobiDBLite consensus disorder prediction 1 19 - -
Gma12g01841 137 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 13 72 - -
Gma12g01841 137 SUPERFAMILY Homeodomain-like 26 70 IPR009057 -
Gma12g01841 137 MobiDBLite consensus disorder prediction 1 26 - -
Gma12g01841 137 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 13 72 - -
Gma12g01841 137 CDD SANT 27 66 IPR001005 -
Gma12g01841 137 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Gma12g01841 137 SMART sant 24 72 IPR001005 -
Gma12g01841 137 Pfam Myb-like DNA-binding domain 25 67 IPR001005 -
Gma12g01841 137 Gene3D - 27 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01841 Gma-Chr12 39083004 39088230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01841 20 73 MYB Transcription Factor Family AT5G14750 51.852 2.93e-15 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma12g01841 Myb_DNA-binding 3.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01841 - - gmx:100801532 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02721 13 41812394 41813927 Gma12g01841 12 39083004 39088230 GST