Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01816 ATGGTGGGCTTTTGTGGGTTTTTCTATTTTTTTTTTCTACTGTCTTTTTCATTGAACTCATCTGATTTTGTTTTTAGTTTTGTATCACAACTTGCATTATATCTGCAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGTCTGGGAAAGAACTCAACAATGGGCAAAAACTTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTAAAGAAATGACAGAGCCCCTGCCAACCCTGCCTAAGGTGGTTTGA 312 0.3974 MVGFCGFFYFFFLLSFSLNSSDFVFSFVSQLALYLQGERNFNRFGGCLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLKEMTEPLPTLPKVV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01816 103 Pfam Replication factor RFC1 C terminal domain 22 96 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Gma12g01816 103 SUPERFAMILY post-AAA+ oligomerization domain-like 16 69 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01816 Gma-Chr12 38772980 38773983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01816 36 101 Core DNA Replication Machinery Family AT5G22010 73.134 8.32e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01816 K10754 - gmx:100500251 134.806