LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g01810	ATGTCATTGCCACCGCCGTCGCTGGTAACGGCGGCGACTCCGACGGAGCTTCCGATCCGGCAGATTCCGGGAAGCTACGGGTTCCCGTTGCTGGGCCCCATCTCGGATCGGCTTGACTACTTCTGGTTCCAGAAGCCAGAGAGCTTCTTCAGAAAGCGAGTGGAGAAATACAAGAGCACCGTGTTCCGCACCAATGTTCCTCCCTCCTTCCCCTTCTTCGTTAACGTTAATCCCAACGTAATCGCGGTTCTCGACGTGAAATCATTCTCCCACCTCTTCGACATGGACCTCGTCGACAAGAAGGATGTTCTCGTCGGAGACTTTGTCCCCAGCGTCGCCTTCACCGGAAACATGAGAGTCGGCGTTTACCAGGACACTACCGAACCTCAACATTCCAAGGTGAAGAACTACATCATGGATATTCTGAAAAGAAGCTCAGGCATATGGGTATCAGAACTAGAATCAAACCTAGACACACTGTGGGACAACATCGAAGCATCACTCTCGAAATCCTCATCAGTTTCGTACCTTTTCCCGTTACAACAGTTTCTCTTCACGTTCCTCTGCAAAGTCCTTGCCGGTGCAGACCCTGCACGTGACCCTAAAATCGCAGAGTCAGGCTATTCCATGCTTAATAGTTGGCTCGCTCTTCAGCTGCTCCCCACAGTCAGCGTGGGCATCCTTCAACCCCTGGAAGAAATCTTCCTCCACTCCTTTGCCTACCCTTTCTTCCTCGTCGGTGGAAACTACAACAACCTCTACAACTTCATCAAGCAACAAGGCAAGGACACTATAAACCGGGGCGCAATCGGGTTCGGGTTAACCGAAGAAGAAGCCATCCACAATTTGCTCTTCGTGCTGGGCTTCAACTCCTACGGCGGATTCTCCATTTTTCTCCCCTCTCTGATCGATGCCATAGCCAGCAACTCCGCATTGCAGGAGAAGCTTAAAAAAGAAGCGAGAGAAAAGGGCGGGTCAACGCTGACCTTCGACTCGGTCAAAGAGATGGACCTGATCCAATCCGTGGTCTACGAAACGCTGCGCATGAACCCTCCGGTTCCACTCCAGTACGGTCGAGCCCGAAAGGACTTCCGGTTGAGTTCGCACGACTCGGTCTTCCACGTCAAGAAGGGCGAGTTGCTGTGCGGCTTTCAGAAGCTCGTCATGAGGGACTCCGTTATATTCGACGAACCGGACCGGTTCAAGCCGGACCGGTTCACCCAAGAGAAAGGGGCCCAGTTGTTGAACTACTTGTATTGGTCCAATGGGCCTCAGACCGGGTCGCCCAGTGTGTCCAATAAACAGTGCGCGGGTAAGGACGTTGTCACACTCACCGCGGCTTTGATTGTGGCGTACCTTTTTCGCAGGTATGATTCCATCCAAGGGGATGGCAGTTCCATCACTGCCCTTCAAAAGACCAAGTGA	1425	0.5277	MSLPPPSLVTAATPTELPIRQIPGSYGFPLLGPISDRLDYFWFQKPESFFRKRVEKYKSTVFRTNVPPSFPFFVNVNPNVIAVLDVKSFSHLFDMDLVDKKDVLVGDFVPSVAFTGNMRVGVYQDTTEPQHSKVKNYIMDILKRSSGIWVSELESNLDTLWDNIEASLSKSSSVSYLFPLQQFLFTFLCKVLAGADPARDPKIAESGYSMLNSWLALQLLPTVSVGILQPLEEIFLHSFAYPFFLVGGNYNNLYNFIKQQGKDTINRGAIGFGLTEEEAIHNLLFVLGFNSYGGFSIFLPSLIDAIASNSALQEKLKKEAREKGGSTLTFDSVKEMDLIQSVVYETLRMNPPVPLQYGRARKDFRLSSHDSVFHVKKGELLCGFQKLVMRDSVIFDEPDRFKPDRFTQEKGAQLLNYLYWSNGPQTGSPSVSNKQCAGKDVVTLTAALIVAYLFRRYDSIQGDGSSITALQKTK	474

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g01810	474	Gene3D	Cytochrome P450	17	472	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma12g01810	474	PANTHER	CYTOCHROME P450 26	10	467	-	-
	Gma12g01810	474	PRINTS	E-class P450 group IV signature	336	352	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma12g01810	474	PRINTS	E-class P450 group IV signature	373	387	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma12g01810	474	PRINTS	E-class P450 group IV signature	389	407	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma12g01810	474	PANTHER	INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED	10	467	-	-
	Gma12g01810	474	Pfam	Cytochrome P450	305	457	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma12g01810	474	SUPERFAMILY	Cytochrome P450	18	461	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g01810	Gma-Chr12	38706974	38712694	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma12g01810	95	474	Cytochrome P450	AT4G15440	61.198	1.01e-178	504

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g01810	K10528		-	gmx:100784395	905.59

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g01810	12	38706974	38712694	Gma12g01810	12	38706974	38712694	ECH