Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01796 ATGGGTGTCTCTGGGAAGTGGATTAAAGCATTGGTTGGTCTAAAGAAATCAGAAAAGCCAGGGTCTTCTGAGAAGGATGGAAATGTTGGCAAGTTTCACCATCAGAGAAGGCATGGTGTTGAATTTGATAATGGTAAATTTCCGAACGAATTGGATAATGCTGCTACTCCACCTGTTGAATATGATAATGGCCATGCAAACCTTGATGCCCACTATTCATCTTCTTCTTCACAACAAGCACATGATGCTGCACATAATCAACAGATGAGGGAGGAATTGGCTGCAATACGCATTCAAACAGCATTTCGAGGATTTCTGGCTAGAAGAGCACTACGGGCTTTGAAAGGTGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCCGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCTAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAGCATCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAACAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGAAATTCAGGCTAAAATATTGAAGAGACAAGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCGTATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCTGTTTCCTCTGGTGGATTTGAACCAGATAAAAATAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAACCGCTTCGTTGACATTAATATGAAGGATGGAGTAACAGTACATGAAGATGGAGCTAAGGATGATAAAAATGGAACCACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCTCATCAAACACACATCCAAACCTGACAAGTCATGGAACTGGTCCCACTATATCTGATGGCTGTGATTCTTCATCTAGTAAGTCTGCAGGTTTGCTAGAATCATCATACACGCAGCCTGTTAAGCTAACTTCTAAGGCAAAAGTTGAAAATACTGTTGAAGAAGTTAACTCAAAACCTAGAATTGGGTCAAGATCCCATAGTAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAATGGGGCTGGAGCTGGATGTCAAATAGTCAAACACCCTGTTAGCACTACTAATGTGATTAGGGATAAACCTAAGCTCAACGGAAGACGGGATGCGAATACAAAACCAGTTCCATAG 1266 0.4384 MGVSGKWIKALVGLKKSEKPGSSEKDGNVGKFHHQRRHGVEFDNGKFPNELDNAATPPVEYDNGHANLDAHYSSSSSQQAHDAAHNQQMREELAAIRIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKHQQNLANEARVRETEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGGFEPDKNSWGWNWLERWMAVRPWENRFVDINMKDGVTVHEDGAKDDKNGTTPQLSSANKKPFSSNTHPNLTSHGTGPTISDGCDSSSSKSAGLLESSYTQPVKLTSKAKVENTVEEVNSKPRIGSRSHSNPKERTSQADKQAKKRLSLPNNGAGAGCQIVKHPVSTTNVIRDKPKLNGRRDANTKPVP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01796 421 MobiDBLite consensus disorder prediction 281 324 - -
Gma12g01796 421 MobiDBLite consensus disorder prediction 68 84 - -
Gma12g01796 421 Gene3D - 90 142 - -
Gma12g01796 421 MobiDBLite consensus disorder prediction 272 324 - -
Gma12g01796 421 MobiDBLite consensus disorder prediction 359 374 - -
Gma12g01796 421 MobiDBLite consensus disorder prediction 41 88 - -
Gma12g01796 421 SMART iq_5 113 134 IPR000048 GO:0005515
Gma12g01796 421 SMART iq_5 90 112 IPR000048 GO:0005515
Gma12g01796 421 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Gma12g01796 421 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Gma12g01796 421 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Gma12g01796 421 Pfam IQ calmodulin-binding motif 94 112 IPR000048 GO:0005515
Gma12g01796 421 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Gma12g01796 421 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Gma12g01796 421 MobiDBLite consensus disorder prediction 342 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01796 Gma-Chr12 38566728 38574232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01796 1 420 IQD Protein Family AT3G22190 54.023 2.17e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01796 - - gmx:100781346 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01796 12 38566728 38574232 Gma12g01796 12 38566728 38574232 ECH
Gma13g02761 13 42188531 42194994 Gma12g01796 12 38566728 38574232 GST