Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01791 ATGGATGTCGATTCCTCGATGGTGCCGGAGACCGATCACGATCCCGCCGTACAGAACCACGCCGCCGATGACCCGGCGCCGGACGCGGCGGAGGGAGAACAGCTAGGGGAGCCGCCGTCGTCCGGAGGCGGATCTCCGGAGCAGACGCAGCCGGCGCCTGCTTCGGCGCCGCAGAGTCCGGTGGTCGGACCGAGGCTGGCGCCTAGTTACACAGTGGTGAATGCAATTTTGGAGAAGAAGGAGGACGGACCGGGGCCGAGGTGCGGCCACACGCTAACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACCCCAGGGTACATTGGTCCGAGGTTGATTTTGTTCGGCGGTGCCACTGCTCTTGAAGGCAATTCCGCGGCGACAGGGACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCATTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCCACTCCTAGGGCTGCACATGTGGCGACTGCTGTAGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCGGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCCGGGCCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCCTGGACACAGCTGCTAAGCCTTATGAATGGCGCAAGCTAGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTTCTTCTGCTTTGTGGAGGCAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCACCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATATAAAATCTGTTGTTACGAGTTCAAGAACTGGTAGATACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCACGCAGCAGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTtgctagatgacctacttgttgctgaagatcttgctgctgctgagacaacagctgctgcttcacatgctgctgctgctgcagctgcatctgcatctaatgtacaagcaggaCGCTTACCTGGACGATATGGATTTGCTGATGATAGAACGAGGGAAACGATGCCTGAGGCAGCTGCTGATGGTTCTGTTGTTTTAGGAAATCCAGTTGCGCCACCAATGAATGGTGACATTTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGGCGAACTGCTAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAGGAGAACGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCGGAGGCTACCCCAAGTGGGAAACAAACATCTTCCTTGATTAAGCCTGACTCTGCAGGTTCAAATAACATTACTCCTGGGGGAGTTCGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGAGGCATGGTTAGACAGCTTTCAATAGATCAATTTGAAAATGAAGGCAGGCGGGTTGGTTACGGGACTCCAGAAAATGCAACTGCTGCCAGGAAATTATTAGATCGGCAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGGCAGTTTTTCTTAGATTGTAATGAAATTGCTGATCTTTGTGATAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTGCAACTAAGGGCTCCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGATCTCATGCGCCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAACACAGTTTGGAAACTATAACCCTTCTTCTTGCTCTGAAGGTTGAGTATCCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCACTGTTTGGTTTCCGAATTGAGTGCATAGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTGGCAGCTTTAATTGAGAAAAAAATTATTTGCATGCACGGTGGTATTGGTCGTTCAATAAATCATGTAGAACAGATTGAAAACATTCAGCGTCCAATTCCAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGACTGCGACCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCCGATCGGGTCATGGAATTTTGTAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTTTCAGCGACTAATTATTGTGGTACCGCAAATAATGCTGGGGCAATATTAGTTTTAGGTAGAGACCTTGTTGTGGTTCCTAAACTAATCCATCCATTACCACCAGCAATTTCTTCACCAGAAACATCACCAGAACCTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCGCCGACGCCAACAAGAGGCCGTCCCCCAGTAACAAACGACCGAGGTTCGCTCGCTTGGATATAG 3012 0.4754 MDVDSSMVPETDHDPAVQNHAADDPAPDAAEGEQLGEPPSSGGGSPEQTQPAPASAPQSPVVGPRLAPSYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAATGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDIKSVVTSSRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASASNVQAGRLPGRYGFADDRTRETMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKQTSSLIKPDSAGSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVGYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPEPHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01791 1003 Pfam Kelch motif 328 374 IPR011498 GO:0005515
Gma12g01791 1003 MobiDBLite consensus disorder prediction 563 584 - -
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Gma12g01791 1003 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Gma12g01791 1003 Gene3D - 264 458 IPR015915 GO:0005515
Gma12g01791 1003 MobiDBLite consensus disorder prediction 548 562 - -
Gma12g01791 1003 CDD MPP_Bsu1_C 652 954 IPR041758 -
Gma12g01791 1003 Gene3D - 68 190 IPR015915 GO:0005515
Gma12g01791 1003 Gene3D - 191 263 IPR015915 GO:0005515
Gma12g01791 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1003 - -
Gma12g01791 1003 MobiDBLite consensus disorder prediction 979 1003 - -
Gma12g01791 1003 MobiDBLite consensus disorder prediction 41 56 - -
Gma12g01791 1003 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Gma12g01791 1003 MobiDBLite consensus disorder prediction 1 65 - -
Gma12g01791 1003 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Gma12g01791 1003 PIRSF STPPP_BSU1 39 1003 IPR012391 GO:0004721|GO:0009742
Gma12g01791 1003 SUPERFAMILY Metallo-dependent phosphatases 657 962 IPR029052 -
Gma12g01791 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1003 - -
Gma12g01791 1003 Gene3D - 637 980 IPR029052 -
Gma12g01791 1003 SUPERFAMILY Kelch motif 142 431 IPR015915 GO:0005515
Gma12g01791 1003 MobiDBLite consensus disorder prediction 546 586 - -
Gma12g01791 1003 SMART pp2a_7 672 956 IPR006186 GO:0016787
Gma12g01791 1003 Pfam Galactose oxidase, central domain 222 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01791 Gma-Chr12 38516183 38527474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01791 664 899 Calmodulin-binding Proteins AT5G63870 29.412 3.45e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01791 - - gmx:100790406 1893.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01791 12 38516183 38527474 Gma12g01791 12 38516183 38527474 ECH
Gma13g02766 13 42235122 42246731 Gma12g01791 12 38516183 38527474 ECH
Gma13g02766 13 42235122 42246731 Gma12g01791 12 38516183 38527474 GST
Gma12g01791 12 38516183 38527474 Gma12g00849 12 8123788 8137007 PCT
Gma12g01791 12 38516183 38527474 Gma11g01439 11 14898384 14912424 PCT
Gma12g00849 12 8123788 8137007 Gma12g01791 12 38516183 38527474 PCT
Gma11g01439 11 14898384 14912424 Gma12g01791 12 38516183 38527474 PCT