Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01784 ATGGCGATGTACTTTCACGGAAGCACTTCGGAAATTCAACCTTCTTCTGCAGATGGCGGCTTGCAAACGCTTTACCTTATGAACCCAACTTACGTACCCTACGCTGACGCGCCGCACCACCCAACAGCGCTCCTCGTCAATCCCAACGCGCTCAACCTCGCGAATATCCCCCACGCGCCGCCAGTGTCACCAAACCATCAGCAGCAGCAGCACGTGATTCACGGCATGACAAACATCCTCGGATCCGGCAATTCCGATGACCACTCCCGACCGTCCTTGTTCGGAGAAAACATCGCCTCCTTCCACGGATTCTCCGGCGGCGGAAGCGCCTCCGCCACAGCCCCTCGCCTTCACTATAACCTCTGGGGTCCGGTGGTTGATCATCCGGGAACGCCGTCTAGCAGCTCCGGTGGCGGTGGTTTCCGGCGGTCGGGTCAGCAAGGTTTATCTCTCAGCCTTTCCTCCCAGCAAACGAATTTTAGATCAGTTTCCGGCGAGCTTGACGTGGCCGGACAGGGCAACGTCGCCGGAATTGGGAACTCGCCGACGTCGGCATCTACCGGTGTTTCAGGTGTTATTATGGGGTCGAACTATTTGAAAGCTGCACAGGAGCTTCTGGATGAAGCTGTGAACGTGGGAAAAGGAATCTACAAAGAGGAAAAATTTGCAGAGAAGGTGAAAGCAAATAGGGAATCTACTAATTCTGGAGCTGCTGGCGGTGGTGATGGTTCAAGTGGTGGAGGAGAAAACAGTGCAGGGAAACAAGTTGTCGAACTCAGCACCGCTCAGAGGCAAGAACTTCAGATGAAGAAGTCTAAGCTTGTCTCCATGCTCGATGAGGTAGAACAAAGGTACAGACAATATCACCACCAAATGCAAATTGTGGTATCATCATTTGAGCAAGCAGCGGGTTATGGGGCGGCAAAATCTTACACTGCCCTTGCCCTAAAAACTATCTCAAAGCAATTCAGGTGCCTGAAAGATGCAATCTCTGCACAAATCAAAGCCACGAGCAAGACATTGGGTGAAGATGATTGCTTAGGAGTTAAAGTAGAAGGGTCAAGGCTTAGGTATGTTGACCACCATCTTCGGCAACAAAGGGCACTTCAGCAACTAGGAATGATTCAGCCCAATGCATGGAGGCCCCAGAGAGGCTTGCCTGAACGAGCTGTTTCCATTCTTCGGGCTTGGCTTTTTGAGCATTTCCTTCACCCATATCCAAAGGACTCCGATAAAGTTATGCTTGCTAAACAAACTGGACTTTCTAGGAGCCAGGTGTCAAACTGGTTTATCAATGCCCGAGTTCGGCTTTGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAAATCAAGGAACATGAACAAGGTAATGCCTCAGAAAACACCAAATCAAAGGAATCGAGCAAGGAGTTGGGTTCAACAGCAAATGTTGCACCCGAATCAGGTGCCATTAAACTCGATCATCTCCAATCAAAGCAAGAAAGCTTCAAACACCAAAACACTTCTCCAACCGAGATCTCAACAAACTCTTCAATGTCTCCAATGGGAGGGTCCCTTCAATCCCCCTCTGGTTTCCATCTTGCAGGATCATCTGACATGCAAATTAGGAGTCCAAAGAAACCAAGAAGTTCGGAAATTCAAAACTCTCCAAGTAGTATACTCTCAGTGGGCATGGAAATGAAGCATAATAATAATGGTGATCATGCAAATAATAGAGAAGCCAACAACACAAAGTTTGGCAATGAAAGGCACCACCAGAAAGATGGATACCCTTTGATGACTAGCAATGCAAACCATGGTGGAGGGTTTGGAGCGTTCACCATGGAAGACATGGGAAGCAGATTTAATGTCACTACTGAGCAACTGGCTTCAAGGTTCCATGGAAATGGTGTTTCTCTCACACTTGGACTTCCCCACAATGAGAACCTTTCTATGCCAGGAACTCAACAACATGGATTTCTCTCACAGAATATACACTTGGGAAGGAGACTTGAAATGGGAACAAATGGAAATGAGTTTTGTGCTATCAACACTCCACCTTCTTCTCACTCAGGAACCACTTATGAGAGCATTGACATTCAAAACAGAAAGAGGTTTGTTGCTCATCAGTTATTGCCAGATTTCGTGGCCTAA 2133 0.4791 MAMYFHGSTSEIQPSSADGGLQTLYLMNPTYVPYADAPHHPTALLVNPNALNLANIPHAPPVSPNHQQQQHVIHGMTNILGSGNSDDHSRPSLFGENIASFHGFSGGGSASATAPRLHYNLWGPVVDHPGTPSSSSGGGGFRRSGQQGLSLSLSSQQTNFRSVSGELDVAGQGNVAGIGNSPTSASTGVSGVIMGSNYLKAAQELLDEAVNVGKGIYKEEKFAEKVKANRESTNSGAAGGGDGSSGGGENSAGKQVVELSTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQIVVSSFEQAAGYGAAKSYTALALKTISKQFRCLKDAISAQIKATSKTLGEDDCLGVKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEIKEHEQGNASENTKSKESSKELGSTANVAPESGAIKLDHLQSKQESFKHQNTSPTEISTNSSMSPMGGSLQSPSGFHLAGSSDMQIRSPKKPRSSEIQNSPSSILSVGMEMKHNNNGDHANNREANNTKFGNERHHQKDGYPLMTSNANHGGGFGAFTMEDMGSRFNVTTEQLASRFHGNGVSLTLGLPHNENLSMPGTQQHGFLSQNIHLGRRLEMGTNGNEFCAINTPPSSHSGTTYESIDIQNRKRFVAHQLLPDFVA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01784 710 Gene3D - 383 445 - -
Gma12g01784 710 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 665 - -
Gma12g01784 710 SUPERFAMILY Homeodomain-like 381 446 IPR009057 -
Gma12g01784 710 SMART HOX_1 380 444 IPR001356 GO:0003677
Gma12g01784 710 MobiDBLite consensus disorder prediction 453 479 - -
Gma12g01784 710 Pfam Homeobox KN domain 397 436 IPR008422 GO:0003677|GO:0006355
Gma12g01784 710 MobiDBLite consensus disorder prediction 493 588 - -
Gma12g01784 710 MobiDBLite consensus disorder prediction 495 559 - -
Gma12g01784 710 MobiDBLite consensus disorder prediction 128 157 - -
Gma12g01784 710 Coils Coil 264 284 - -
Gma12g01784 710 ProSiteProfiles 'Homeobox' domain profile. 377 440 IPR001356 GO:0003677
Gma12g01784 710 MobiDBLite consensus disorder prediction 453 467 - -
Gma12g01784 710 Pfam Associated with HOX 192 331 IPR006563 -
Gma12g01784 710 MobiDBLite consensus disorder prediction 129 157 - -
Gma12g01784 710 SMART prehox3 187 332 IPR006563 -
Gma12g01784 710 MobiDBLite consensus disorder prediction 228 254 - -
Gma12g01784 710 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 665 - -
Gma12g01784 710 CDD homeodomain 380 441 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01784 Gma-Chr12 38456213 38460047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01784 1 710 Homeobox Transcription Factor Family AT2G35940 44.459 2.72e-142 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma12g01784 POX 1.1e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01784 - - gmx:100779075 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01784 12 38456213 38460047 Gma12g01784 12 38456213 38460047 ECH
Gma13g02774 13 42293472 42298555 Gma12g01784 12 38456213 38460047 GST
Gma12g01784 12 38456213 38460047 Gma12g00843 12 8010269 8014529 PCT
Gma12g01784 12 38456213 38460047 Gma11g01455 11 15160717 15164938 PCT
Gma12g00843 12 8010269 8014529 Gma12g01784 12 38456213 38460047 PCT
Gma11g01455 11 15160717 15164938 Gma12g01784 12 38456213 38460047 PCT