Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01783 ATGGGGTTTATGTTGAAAGAAGCTTTGAGGACTCTCTGTGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCCAAGCTATTAATTTGGGAAGAATGCTATTATGAACCTTTACCATGCCCTCCGCACATGTTTGGGATGCCTGATTTACCTTACCAAAATGGGGAAGGATGCTGGTTTTCTTTAGAGTATCGGTCATCGCAGCTTGGGATTCAAGAGGATGACCAAGTCTCTTCTTTGATTAACAAAATGACAGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATAGTTGGACGGGCTGCATTTACAGGCAGCCATCAGTGGATTCTTTTGAACAATTTCACTAAAGATGCATATCCTCCACAGGTATATGCTGAGGTACATCACCAATTTTCAGCTGGAATACAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTTCCTATAATTGAGAATATGGGATTTGTGAAAGATGTGAAGAGCTTGATCTTGCAATTGGGATGTGTTTCTGGCGCCCTTCTATCTGCAGACTATTCAGAAAAACTTTCTAATGAAAGACTTGCTGGACCTCCTATTGCTGGTGTACCTGTGTCTGTCGATCGACCTGTCATTACCTCAAACTGTCCTCCCTCAGTAACTACTGGCTCCAATCAGCAAAATAATTCATCTCATGCTTCAATGCCTTGTCCTCTAATGGAAGACACAAATACTTGCCAGGGTTCTGCATTGACACCCCTAACCCGTAAACTGAGCCAGATATCCAATAAACCTTGCCAACCAAAGGTTATTCGAATGAGTAAAACAAGCTTTGCTAGCCAACAAGAGAATAGAGCTGTCGAAGCTGAAGTAATACCCTCAGATCTTGATTCATGCCTGCAGCAGCATTCTGTTTCATATAATGCAAGATCTGCATTCAGTAACATAACTGGTTTGGGGTCTCTTGGTCAATCTGGTCTAAGTGTTGATAATCTTGCATTAATGGAGCAACAAATCTTATCAGGCATTGGGAATCGAGATAATGTTAACCCTTGTGTAAATGCCTCAAGTTCCTTGAACATGTCTCAACTAAAAACAGATGGAGACCATCTACTTGGCCACAATATGAGTTTTGACAGTACTTCACTAGTGGGAGGAGTCCCACTACATGGTGGGATGAGTACTCTTTTGAGTTCAACTCTGATTACTAGTTCTGGTTCAAAATCTCCCCGAGCATCCACAGCTGTTTTATCTGGAGTAGGAGTTGGGATTGGACCTCAAAATTGTGTTTCTTCAACTAAAGCAAGGGTTTGTTCTTTGGCAAATTTGACTAGTCAACCAGGCACCTTCCCCAAGCATGTAGAAGGTTCTGATCAGAAGATTCTCCCTGTAGATTTAAAGTGTGCTTCAACAAATCAAAAGATAGACTATGATATGCTTCAGGCCCCTAATCTCCCTTCTTTCCAAGTTGAGGAACATGTGCCCATTAATAGTCAAATCCCTGGTTTTGCCCACGATTGCCTTCTTAAAGATGGTAGTAGTCAATCTATGATGACAATGGATCCTAAACACAAACTAGATTGTGCTAAACCTCCATCGGGTGATGACTTGTTCGATGTTTTAGGGGTGGATTTGAAAAACCAATTGCTGAATGGAAACTGGGATAATCTCTTTACTTATGAATCAGATGCTAATGCAGAAAATATGGACAAAAAGATAGCACCTATGAACATGCAAGGTGCAACAACTAATCCTGATATTTATTCGGTTAAAGAAGCAATATCAGACTGCGGCATCTTTTCTGGGATGGGAACAGACCACCTCTTGGATGCCGTGGTCTCCAAAGCCAAATCTGTTGTGAAACAGGATTCTGATGACATGTCTTGCAGGACAACATTGACAAGGAATAGTACTTCCTCTGTTCCTTCTCCTGCACGGAGGACGGTAGTGTCTGGTCATTTCCAAGGGGGATTATTTGATTTGCCTAAGAATGATGGTAAAACAGGTGCCACAGAAACTAGTTTTCTTAGGTCTGGATGTAACAAGGATGATGCTGGAAACTGTTCTCAAACTAGTTCTGTTTATGGCTCTCAACTTAGTTCATGGGTTGAGAATAGTGGGAGTGTGAAATGTGAGAATAGTGCTTCAACTAGATACTCAAAGAGGCCAGATGAAGCTTGCAAGCCAAATCGTAAAAGGCTTAAACCTGGAGAGAATCCCAGGCCTCGACCGAAAGATCGTCAAATGATTCAAGATCGAGTGAAAGAGTTACGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCATATGCTTTTCTTACAAAGTGTGACAAAGCATGCTGACAagctgaaacaaacaggggagtctaagATTATTAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGTGGGGCTACATGGGCATATGAAGTTGGCACACAATCAATGGTTTGCCCTATTGTAGTTGAGGATCTGAATCCACCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTTTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTAAAGGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCGCGCTTTGCTGTTGAGGCAAACAGGGATTTAACAAGGATGGAAATATTTATGTCACTAGTTCGTCTTTTGGAGAAAACGGTGAAGGGCAACACATCTCCATCCAACGCAATTGATAACATGGTGTATCACTCTTTCCCACAGGCTGCTCAGATACCAGTAACCGGAAGGCCTAGTAGTTTGCAGTGA 2859 0.4166 MGFMLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPHMFGMPDLPYQNGEGCWFSLEYRSSQLGIQEDDQVSSLINKMTVNNSVIIAGEGIVGRAAFTGSHQWILLNNFTKDAYPPQVYAEVHHQFSAGIQTVAVIPVLPHGVVQLGSFFPIIENMGFVKDVKSLILQLGCVSGALLSADYSEKLSNERLAGPPIAGVPVSVDRPVITSNCPPSVTTGSNQQNNSSHASMPCPLMEDTNTCQGSALTPLTRKLSQISNKPCQPKVIRMSKTSFASQQENRAVEAEVIPSDLDSCLQQHSVSYNARSAFSNITGLGSLGQSGLSVDNLALMEQQILSGIGNRDNVNPCVNASSSLNMSQLKTDGDHLLGHNMSFDSTSLVGGVPLHGGMSTLLSSTLITSSGSKSPRASTAVLSGVGVGIGPQNCVSSTKARVCSLANLTSQPGTFPKHVEGSDQKILPVDLKCASTNQKIDYDMLQAPNLPSFQVEEHVPINSQIPGFAHDCLLKDGSSQSMMTMDPKHKLDCAKPPSGDDLFDVLGVDLKNQLLNGNWDNLFTYESDANAENMDKKIAPMNMQGATTNPDIYSVKEAISDCGIFSGMGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPARRTVVSGHFQGGLFDLPKNDGKTGATETSFLRSGCNKDDAGNCSQTSSVYGSQLSSWVENSGSVKCENSASTRYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGTQSMVCPIVVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDLTRMEIFMSLVRLLEKTVKGNTSPSNAIDNMVYHSFPQAAQIPVTGRPSSLQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01783 952 MobiDBLite consensus disorder prediction 720 756 - -
Gma12g01783 952 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
Gma12g01783 952 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 952 IPR043561 GO:0003700|GO:0006355
Gma12g01783 952 CDD bHLH_AtLHW_like 745 814 - -
Gma12g01783 952 MobiDBLite consensus disorder prediction 724 756 - -
Gma12g01783 952 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 741 790 IPR011598 GO:0046983
Gma12g01783 952 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01783 Gma-Chr12 38407007 38413891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01783 529 946 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.896 1.35e-116 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01783 - - gmx:100787748 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01783 12 38407007 38413891 Gma12g01783 12 38407007 38413891 ECH
Gma13g02775 13 42338522 42345630 Gma12g01783 12 38407007 38413891 GST
Gma12g01783 12 38407007 38413891 Gma12g00842 12 7927738 7935707 PCT
Gma12g01783 12 38407007 38413891 Gma11g01456 11 15239252 15245419 PCT
Gma12g00842 12 7927738 7935707 Gma12g01783 12 38407007 38413891 PCT
Gma11g01456 11 15239252 15245419 Gma12g01783 12 38407007 38413891 PCT