Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01770 ATGAGAGCCCTATACAAAGCAAATGGAGGCTGTGGGTGTAGCAAACCAAAATCCTCTGACGTCCACGAACCCACCCCAAAACCCAAAATCTCCATTTACCAAAACACAAACCCTAGCAGCCTCAATTCATCCACCACTTCCGGTGACCGCAACGACGACGATGAAGTCTTTACTTCCACCACCATCTCCGAACCCGACACAAATCAACAAAACCCCAACAACAACAACAGTATGCCAAAACCAAACCCAAAACTCGTTGACAGCATCGCCGTTGAGAAGGACTCAAACGACCCACATAAGGATTTCCGAGCCTCCATGCTCCAAATGATCCTCGAGAGAGAGATCTACACAGAAACCGATCTCCGAGAGCTTCTCGAGTGCTTCCTCAAGCTGAACGCCACGTGCCACCACCAACTCATCGTTCAAGCCTTCATGGAGATCTGCGAAGAAGTGTTCCCGAAGAAGAGCATGGTCAAGGGTGGTGGCGCTCCTGATCAACAATGTCGCAGGAACCAGATCACAAGAAAGAGTCGGTGA 537 0.4991 MRALYKANGGCGCSKPKSSDVHEPTPKPKISIYQNTNPSSLNSSTTSGDRNDDDEVFTSTTISEPDTNQQNPNNNNSMPKPNPKLVDSIAVEKDSNDPHKDFRASMLQMILEREIYTETDLRELLECFLKLNATCHHQLIVQAFMEICEEVFPKKSMVKGGGAPDQQCRRNQITRKSR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01770 178 MobiDBLite consensus disorder prediction 29 47 - -
Gma12g01770 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 169 IPR038933 GO:0045892
Gma12g01770 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 89 149 IPR006458 -
Gma12g01770 178 MobiDBLite consensus disorder prediction 159 178 - -
Gma12g01770 178 MobiDBLite consensus disorder prediction 1 85 - -
Gma12g01770 178 MobiDBLite consensus disorder prediction 58 82 - -
Gma12g01770 178 ProSiteProfiles OVATE domain profile. 91 150 IPR006458 -
Gma12g01770 178 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 2 169 - -
Gma12g01770 178 Pfam Transcriptional repressor, ovate 95 152 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01770 Gma-Chr12 38290084 38290620 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma12g01770 Ovate 7.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01770 - - gmx:102670259 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01770 12 38290084 38290620 Gma12g01770 12 38290084 38290620 ECH
Gma13g02785 13 42426001 42427260 Gma12g01770 12 38290084 38290620 GST
Gma12g01770 12 38290084 38290620 Gma12g00830 12 7763394 7764248 PCT
Gma12g01770 12 38290084 38290620 Gma11g01467 11 15413949 15414567 PCT
Gma12g00830 12 7763394 7764248 Gma12g01770 12 38290084 38290620 PCT
Gma11g01467 11 15413949 15414567 Gma12g01770 12 38290084 38290620 PCT