Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01762 ATGGAAGGGGTTTCGAGGGAGGCTCAGATGTCGATTGCTGCTTCTTCCATGTTTCCTGGATTCAGATTCTGCCCCACTGATGAGGAGTTGATTTCTTATTACCTTAGGAAGAAGATGGATGGCCATCAAGAGAGTGTTCAAGTCATTTCTGAGGTTGAACTTTGTAAATACGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAATGGTTCTTCTTCTCTCCCCGAGGAAGAAAGTACCCAAAAGGTTCACAAAGTAAAAGAGCAACTGAATGTGGATATTGGAAGGCAACTGGCAAAGAGCGTAATGTAAAGTCAGGTTCTAACGTTATAGGAACGAAGCGGACTTTGGTGTTCCACTTAGGGCGTGCACCTAAAGGGGAGAGGACCGAATGGATTATGCATGAGTACTGCATCAATGAAAAGTCTCAGGATTCTTTGGTCATTTGTCGCCTCAAGAAGAACACAGAGTTCCGTTTGGGCGATTCTTCGAATAGAGCTTCATCAAGTCAAAGGCACCCCGTAGGATGTAGCTCCAAGAGGGACAGTTGCAGTTATGGTTCTCCTTCAATGGAGCAAATTGATTCTGTGTCCGAACCGAATCAGAGACCGGTTAGTGAAGCTACTTTGGCAGTGTCTTCAGGCCAACCAAAGGAGAGATATGAAGAGGATTGTTATGCTGAGATACTAAAGGATGATATCATTAAATTAGATGAATCATCAATCTCGGTAGAGGGTCACACAAGACCACAGGATCCTATACAGATGCATCCTTCACCACAAGGCACATCACAACGGAGAATAAGATTAAGGGTTGGGAATTCAAAGCATTCTCCTGCAGTAGTTCGTTTCCCTTGCACAATGCACTCGTCAAAGAGTACCTTCTTCGCCAGAATAACCATTAGTTTGGTGGTATTTCCTTTCTTTGTCTTCACTTTGACAGTTCTATATTTTTTGTCTTTAGTGGGTGGAAACAAACAAAAAGTTGAAAGAGAGAGAAACATCGAGCTGCAGTTCTGTTCTAGGGTTACACTTGTTTCCATTGCTGGTAAAGAATCTCCAATCTTCCAACACTGCGTCACTCGCTTTGTTCCCAATTCAGTCCACAATTTACTTTTTCCACTTTCCCCTAACCTCCCACTCGGAACTCGTCGTTACCTATCGATAATGAATTTGGGGTTACCTCGCTCACATCCATCGTTCGAGTGGAAGCAGCAGCTTGTGGCCGATGTTGACTCTAACCCCAGCGTGTCGCAGAAGCAGCATCAGATTTCCAAGGCTGGAGAAACCGTTAAGGAGAAGATTATTTTAGTGCAAGAGAAGAATATTCGAAGACTGAATGAGCTAGTTCGGCATCTCCAGGAGCAACTGCAGCAGTGTAGAGGACGCAATGGAACTATAAATGGCACTGTAAGCCCTCTAGCTGAGCGGATTCTTGAGCTTGAGCGACAGCAAATTTTAGAGGATTAA 1482 0.4406 MEGVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKMDGHQESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPKGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINEKSQDSLVICRLKKNTEFRLGDSSNRASSSQRHPVGCSSKRDSCSYGSPSMEQIDSVSEPNQRPVSEATLAVSSGQPKERYEEDCYAEILKDDIIKLDESSISVEGHTRPQDPIQMHPSPQGTSQRRIRLRVGNSKHSPAVVRFPCTMHSSKSTFFARITISLVVFPFFVFTLTVLYFLSLVGGNKQKVERERNIELQFCSRVTLVSIAGKESPIFQHCVTRFVPNSVHNLLFPLSPNLPLGTRRYLSIMNLGLPRSHPSFEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEKNIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01762 493 MobiDBLite consensus disorder prediction 165 217 - -
Gma12g01762 493 Gene3D NAC domain 26 164 IPR036093 GO:0003677|GO:0006355
Gma12g01762 493 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
Gma12g01762 493 Coils Coil 440 467 - -
Gma12g01762 493 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 11 342 - -
Gma12g01762 493 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 342 - -
Gma12g01762 493 MobiDBLite consensus disorder prediction 250 269 - -
Gma12g01762 493 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Gma12g01762 493 SUPERFAMILY NAC domain 9 158 IPR036093 GO:0003677|GO:0006355
Gma12g01762 493 MobiDBLite consensus disorder prediction 165 218 - -
Gma12g01762 493 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01762 Gma-Chr12 38200207 38210142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01762 4 257 NAC Transcription Factor Family AT2G27300 55.859 6.37e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma12g01762 NAM 6.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01762 - - gsj:114373381 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01762 12 38200207 38210142 Gma12g01762 12 38200207 38210142 ECH