Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01746 ATGAGTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGATTCCAAGGAAAAGAACAGGAAATTTGTGGAGACCATTGAACTCCAAATTGGGCTGAAAAACTATGATCCCCAGAAGGACAAGCGTTTTAGTGGCTCTGTTAAGTTGCCTCACATTCCTCGCCCCAAGATGAAGATTTGTATGCTTGGAGATGCCCAACACGTTGAAGAGGCTGAGAAGATAGGATTGGACTACATGGATGTCGAGGCCTTGAAGAAGCTTAACAAAAACAAGAAATTGGTGAAAAAACTAGCCAAAAAATATCATGCCTTTTTGGCCTCTGAAGCAGTCATCAAGCAGATTCCTCGTCTCTTGGGACCTGGTCTCAACAAGGCAGGCATGTTTTATTGGAAGTTCCCTACGCTTGTGACTCACCAAGAATCTCTCGAGTCAAAGGTTAATGAGACCAAGGCCATGGTGAAGTTCCAGCTTAAGAAGGTGCTTTGCATGGGAGTAGCCGTGGGGAATGTTAGCATGGAGGAAAAGCAAATCTTCCAAAATGTACAACTGAGTGTTAACTTCCTTGTCTCTTTGTTGAAAAAGAATTGGCAGAACGTTCGCTGCCTTGAATTTCTGATCGCACCTAATATATTGTCTTTCGATAGGTGA 663 0.4314 MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGMFYWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLEFLIAPNILSFDR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01746 220 Gene3D - 65 158 IPR016095 -
Gma12g01746 220 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 207 - -
Gma12g01746 220 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 207 - -
Gma12g01746 220 Pfam Ribosomal protein L1p/L10e family 22 205 IPR028364 -
Gma12g01746 220 Gene3D - 21 206 - -
Gma12g01746 220 CDD Ribosomal_L1 9 207 IPR028364 -
Gma12g01746 220 SUPERFAMILY Ribosomal protein L1 3 207 IPR023674 -
Gma12g01746 220 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 208 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01746 Gma-Chr12 38058824 38063101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01746 1 207 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.406 3.43e-118 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01746 K02865 - gmx:100305550 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01746 12 38058824 38063101 Gma12g01746 12 38058824 38063101 ECH
Gma13g02805 13 42608257 42609981 Gma12g01746 12 38058824 38063101 GST