Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01741 ATGGTGATTCCAATAGCAGTGTCGCTGGTGGTGATTCTCATAGGGTTGGCTTATAAGGCCGTAAAGCCGCCACCTCCTAAAATATGTGGATCCGTAGGTGGTCCTGAAGTAGCTTCACCCAGAGTGAAGCTCAGTGATGGGAGGCATTTGGCCTACCGAGAATTTGGTGTTCCAAAGGAAGAAGCTAGGTACAAGATCATTGTCATTCATGGTTATGACAGTTCCAAAGACACAAGTTTACCAGTTTCTCAAGAACTTGTTGAAGATCTAGGGATATATTTCCTCCACTTTGACAGAGCAGGTTATGGTGAAAGTGATCCACATTCGTTACGTTCTGTGAAGAGTGAAGCATATGATATTCAAGAACTAGCTGATAAATTGGAGATTGGTCATAAGTTTTATATAATTGGTATGTCAATGGGAGGTTACCCTGTTTGGAGCTGCCTAAAATACATTCCACACAGATTATCAGGAGCAGCCTTGGTGGCTCCATTTATAAGCTATTGGTGGCCTTCTTATCCTGAAAATCTACTAAGAGAAGCATTTCTGATGCTACCTCACTCAGACCAATGGACTTTTCGAGTTTCACATTATGCCCCTTGGTTGTTCTATTGGTGGATGACTCAAAAATGGTTCCCTTCATTGACTTTGACAAATTTGTTGTCTCCTGATGATATAGAGATCGTGAAGAGCTTGTCAGAACTCCAAAACACTGGCCAGGAGAGGATAACTCAGCAAGGTCTAGAGCAAATGAAAAGAGTAAAACATCATCTTAAATTGTTGACACAAATCCCCCTGGTTCAGACACAGAATATCTGCAGATGTTTCTGTCAAGGCACTCAACTATCTCCAAACCACAACGGTTCATCAGATGATTTTCCCGTGGTTTCACCAAGAATCAAACTCAGAGATGGGAGGCACCTTGCCTATATTGAGAGAGGCGTCCCCAAAGACATAGCAAAGTACAAGATCGTCATTGTGCACGGCTTTGGAAGCTCCAAAGAGATGAATTTTCTGGCACCCCAAGAATTAATAGATGAGTTGGGTATATATCTTCTGCAATATGACCGGGCTGGATATGGAGAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTCAAGAGCTTGCTGATCAGCTACAATTAGGACCACAGTTTTATGTGATTGGAGTCTCAATGGGTTCATACGCTACTTGGAGTTGTCTAAAGTATTTGCCCCACAGGCTTGCAGGGTTGGCACTGATAGCACCAGTGATCAATTACAGGTGGCCTTCATTCCCTAAGAGACTGATAAGGGAGGACTACAGGAGGAAACTTGTCCAGTGGTGTATGTGGCTTGCAAACCACTGGCCTAGACTATTGCATTGGTGGGTCACTCAAAAGTGGCTCCCTTCAACTGCTGTCATAGAGAAGAACCCTGCATTTTTCAACAAAAGTGATGTGGATATTCTAAAGACAATTCCTGGGTTCCCTATGCTTACAAAGgacagtttaagggaaaaggctgtttttgacactcttcgccatgactggagggtggcttttggaaaatgggaatttgacccaatgaagctaagtaatccattccctcacaatacagTTTCTGAGACAAAAGCTGTCGCTTATGACAGGTTGTTCCAAGAATTAGCACCTTTATCGACACACATGTCTCTCCAACAACCAAATCAAGAGGTGCCATTGCAAGAACCAGAAGCCACATTTTCTCAACTAAGCAAACAAAACTCAATACTCTCACTCACCCTTGATGAGTTCTATTGCAAGAATGGAAAGAGCTTAGGATCCATGAACATGGATGAATTCCTTTCTAGCATTTGGAACTCTGATGACAACAACCAAGTTAACCCATCACTACCCACCCTTGATGAAGCTGCAAAGGGTAAAAGTGTAGTAGCAACAGAACCCACCACCATTTCCCAGCCATTATCTGTCCCTCCCCCAATTTGCAAGAAAACTGTGGATGAAATTTGGTCTCAGATCCACAAAAGCCAACCACACTACAATGAAGCTAACAATAGCCTTGCCAGGAATGAGCCACTACTCAAAAGGCAGCAAACACTTGGGGAAATGACTTTGGAGGATTTCCTAGTAAAAGCTGGGGTGGTACAAGAATCATCATCACTATTCAAGTCTTCATTACTATATCAAAATCAGATTGGTAACATTGCAAGTAATGGGCCATTGAGTGCAAGTTATAGGTTCAGGCATGTAATAGGGACAGGATCTAGTGTGTCTTGTAATGGGCTTGAAACACAAAACATGTTGGCACAGAATAACAACTTAGTTATAAAGGATGTCACTACAAATGGTGCTGTGGAGAAATGTCCAAGCTTAGGAGAATCAAGTGGGAAGGGTAATAGGAAGAGGATCATTGATGGCCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCGGCGGCACGTTCTCGAGCAAGAAGACAGGCATATACGGTAGAGCTTGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAACGAAAAGCTCAAACAAACTCTGGCCGATGCTGAACGCAAGAGAAAACAAGAGATTTCTCAGAGAAAGCACACAACAATGGCTCAAAAGAGGACAGAAAAATTGAGGTCAATGAAGAGGCCTCTAAGCGCATCCTGGTGA 2685 0.4123 MVIPIAVSLVVILIGLAYKAVKPPPPKICGSVGGPEVASPRVKLSDGRHLAYREFGVPKEEARYKIIVIHGYDSSKDTSLPVSQELVEDLGIYFLHFDRAGYGESDPHSLRSVKSEAYDIQELADKLEIGHKFYIIGMSMGGYPVWSCLKYIPHRLSGAALVAPFISYWWPSYPENLLREAFLMLPHSDQWTFRVSHYAPWLFYWWMTQKWFPSLTLTNLLSPDDIEIVKSLSELQNTGQERITQQGLEQMKRVKHHLKLLTQIPLVQTQNICRCFCQGTQLSPNHNGSSDDFPVVSPRIKLRDGRHLAYIERGVPKDIAKYKIVIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLQLGPQFYVIGVSMGSYATWSCLKYLPHRLAGLALIAPVINYRWPSFPKRLIREDYRRKLVQWCMWLANHWPRLLHWWVTQKWLPSTAVIEKNPAFFNKSDVDILKTIPGFPMLTKDSLREKAVFDTLRHDWRVAFGKWEFDPMKLSNPFPHNTVSETKAVAYDRLFQELAPLSTHMSLQQPNQEVPLQEPEATFSQLSKQNSILSLTLDEFYCKNGKSLGSMNMDEFLSSIWNSDDNNQVNPSLPTLDEAAKGKSVVATEPTTISQPLSVPPPICKKTVDEIWSQIHKSQPHYNEANNSLARNEPLLKRQQTLGEMTLEDFLVKAGVVQESSSLFKSSLLYQNQIGNIASNGPLSASYRFRHVIGTGSSVSCNGLETQNMLAQNNNLVIKDVTTNGAVEKCPSLGESSGKGNRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLADAERKRKQEISQRKHTTMAQKRTEKLRSMKRPLSASW 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01741 894 MobiDBLite consensus disorder prediction 856 894 - -
Gma12g01741 894 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 810 862 IPR004827 GO:0003700|GO:0006355
Gma12g01741 894 SUPERFAMILY alpha/beta-Hydrolases 36 221 IPR029058 -
Gma12g01741 894 Pfam bZIP transcription factor 812 862 IPR004827 GO:0003700|GO:0006355
Gma12g01741 894 Coils Coil 831 869 - -
Gma12g01741 894 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 251 864 - -
Gma12g01741 894 SUPERFAMILY alpha/beta-Hydrolases 293 472 IPR029058 -
Gma12g01741 894 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 815 830 IPR004827 GO:0003700|GO:0006355
Gma12g01741 894 SMART brlzneu 808 872 IPR004827 GO:0003700|GO:0006355
Gma12g01741 894 Gene3D alpha/beta hydrolase 35 263 IPR029058 -
Gma12g01741 894 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 29 244 - -
Gma12g01741 894 Pfam Serine aminopeptidase, S33 321 459 IPR022742 -
Gma12g01741 894 Pfam Serine aminopeptidase, S33 61 196 IPR022742 -
Gma12g01741 894 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 251 864 - -
Gma12g01741 894 MobiDBLite consensus disorder prediction 856 886 - -
Gma12g01741 894 SUPERFAMILY Leucine zipper domain 812 861 IPR046347 GO:0003700|GO:0006355
Gma12g01741 894 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 29 244 - -
Gma12g01741 894 Gene3D - 810 865 - -
Gma12g01741 894 Gene3D alpha/beta hydrolase 296 534 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01741 Gma-Chr12 37995503 38006410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01741 558 894 bZIP Transcription Factor Family AT3G44460 42.655 1.43e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g01741 Hydrolase_4 7.5e-10 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01741 - K14432 gmx:100820370 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01741 12 37995503 38006410 Gma12g01741 12 37995503 38006410 ECH
Gma12g01741 12 37995503 38006410 Gma03g01790 03 44015499 44021024 ECH
Gma13g02810 13 42646752 42648158 Gma12g01741 12 37995503 38006410 GST