Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma12g01741 | ATGGTGATTCCAATAGCAGTGTCGCTGGTGGTGATTCTCATAGGGTTGGCTTATAAGGCCGTAAAGCCGCCACCTCCTAAAATATGTGGATCCGTAGGTGGTCCTGAAGTAGCTTCACCCAGAGTGAAGCTCAGTGATGGGAGGCATTTGGCCTACCGAGAATTTGGTGTTCCAAAGGAAGAAGCTAGGTACAAGATCATTGTCATTCATGGTTATGACAGTTCCAAAGACACAAGTTTACCAGTTTCTCAAGAACTTGTTGAAGATCTAGGGATATATTTCCTCCACTTTGACAGAGCAGGTTATGGTGAAAGTGATCCACATTCGTTACGTTCTGTGAAGAGTGAAGCATATGATATTCAAGAACTAGCTGATAAATTGGAGATTGGTCATAAGTTTTATATAATTGGTATGTCAATGGGAGGTTACCCTGTTTGGAGCTGCCTAAAATACATTCCACACAGATTATCAGGAGCAGCCTTGGTGGCTCCATTTATAAGCTATTGGTGGCCTTCTTATCCTGAAAATCTACTAAGAGAAGCATTTCTGATGCTACCTCACTCAGACCAATGGACTTTTCGAGTTTCACATTATGCCCCTTGGTTGTTCTATTGGTGGATGACTCAAAAATGGTTCCCTTCATTGACTTTGACAAATTTGTTGTCTCCTGATGATATAGAGATCGTGAAGAGCTTGTCAGAACTCCAAAACACTGGCCAGGAGAGGATAACTCAGCAAGGTCTAGAGCAAATGAAAAGAGTAAAACATCATCTTAAATTGTTGACACAAATCCCCCTGGTTCAGACACAGAATATCTGCAGATGTTTCTGTCAAGGCACTCAACTATCTCCAAACCACAACGGTTCATCAGATGATTTTCCCGTGGTTTCACCAAGAATCAAACTCAGAGATGGGAGGCACCTTGCCTATATTGAGAGAGGCGTCCCCAAAGACATAGCAAAGTACAAGATCGTCATTGTGCACGGCTTTGGAAGCTCCAAAGAGATGAATTTTCTGGCACCCCAAGAATTAATAGATGAGTTGGGTATATATCTTCTGCAATATGACCGGGCTGGATATGGAGAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTCAAGAGCTTGCTGATCAGCTACAATTAGGACCACAGTTTTATGTGATTGGAGTCTCAATGGGTTCATACGCTACTTGGAGTTGTCTAAAGTATTTGCCCCACAGGCTTGCAGGGTTGGCACTGATAGCACCAGTGATCAATTACAGGTGGCCTTCATTCCCTAAGAGACTGATAAGGGAGGACTACAGGAGGAAACTTGTCCAGTGGTGTATGTGGCTTGCAAACCACTGGCCTAGACTATTGCATTGGTGGGTCACTCAAAAGTGGCTCCCTTCAACTGCTGTCATAGAGAAGAACCCTGCATTTTTCAACAAAAGTGATGTGGATATTCTAAAGACAATTCCTGGGTTCCCTATGCTTACAAAGgacagtttaagggaaaaggctgtttttgacactcttcgccatgactggagggtggcttttggaaaatgggaatttgacccaatgaagctaagtaatccattccctcacaatacagTTTCTGAGACAAAAGCTGTCGCTTATGACAGGTTGTTCCAAGAATTAGCACCTTTATCGACACACATGTCTCTCCAACAACCAAATCAAGAGGTGCCATTGCAAGAACCAGAAGCCACATTTTCTCAACTAAGCAAACAAAACTCAATACTCTCACTCACCCTTGATGAGTTCTATTGCAAGAATGGAAAGAGCTTAGGATCCATGAACATGGATGAATTCCTTTCTAGCATTTGGAACTCTGATGACAACAACCAAGTTAACCCATCACTACCCACCCTTGATGAAGCTGCAAAGGGTAAAAGTGTAGTAGCAACAGAACCCACCACCATTTCCCAGCCATTATCTGTCCCTCCCCCAATTTGCAAGAAAACTGTGGATGAAATTTGGTCTCAGATCCACAAAAGCCAACCACACTACAATGAAGCTAACAATAGCCTTGCCAGGAATGAGCCACTACTCAAAAGGCAGCAAACACTTGGGGAAATGACTTTGGAGGATTTCCTAGTAAAAGCTGGGGTGGTACAAGAATCATCATCACTATTCAAGTCTTCATTACTATATCAAAATCAGATTGGTAACATTGCAAGTAATGGGCCATTGAGTGCAAGTTATAGGTTCAGGCATGTAATAGGGACAGGATCTAGTGTGTCTTGTAATGGGCTTGAAACACAAAACATGTTGGCACAGAATAACAACTTAGTTATAAAGGATGTCACTACAAATGGTGCTGTGGAGAAATGTCCAAGCTTAGGAGAATCAAGTGGGAAGGGTAATAGGAAGAGGATCATTGATGGCCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCGGCGGCACGTTCTCGAGCAAGAAGACAGGCATATACGGTAGAGCTTGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAACGAAAAGCTCAAACAAACTCTGGCCGATGCTGAACGCAAGAGAAAACAAGAGATTTCTCAGAGAAAGCACACAACAATGGCTCAAAAGAGGACAGAAAAATTGAGGTCAATGAAGAGGCCTCTAAGCGCATCCTGGTGA | 2685 | 0.4123 | MVIPIAVSLVVILIGLAYKAVKPPPPKICGSVGGPEVASPRVKLSDGRHLAYREFGVPKEEARYKIIVIHGYDSSKDTSLPVSQELVEDLGIYFLHFDRAGYGESDPHSLRSVKSEAYDIQELADKLEIGHKFYIIGMSMGGYPVWSCLKYIPHRLSGAALVAPFISYWWPSYPENLLREAFLMLPHSDQWTFRVSHYAPWLFYWWMTQKWFPSLTLTNLLSPDDIEIVKSLSELQNTGQERITQQGLEQMKRVKHHLKLLTQIPLVQTQNICRCFCQGTQLSPNHNGSSDDFPVVSPRIKLRDGRHLAYIERGVPKDIAKYKIVIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLQLGPQFYVIGVSMGSYATWSCLKYLPHRLAGLALIAPVINYRWPSFPKRLIREDYRRKLVQWCMWLANHWPRLLHWWVTQKWLPSTAVIEKNPAFFNKSDVDILKTIPGFPMLTKDSLREKAVFDTLRHDWRVAFGKWEFDPMKLSNPFPHNTVSETKAVAYDRLFQELAPLSTHMSLQQPNQEVPLQEPEATFSQLSKQNSILSLTLDEFYCKNGKSLGSMNMDEFLSSIWNSDDNNQVNPSLPTLDEAAKGKSVVATEPTTISQPLSVPPPICKKTVDEIWSQIHKSQPHYNEANNSLARNEPLLKRQQTLGEMTLEDFLVKAGVVQESSSLFKSSLLYQNQIGNIASNGPLSASYRFRHVIGTGSSVSCNGLETQNMLAQNNNLVIKDVTTNGAVEKCPSLGESSGKGNRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLADAERKRKQEISQRKHTTMAQKRTEKLRSMKRPLSASW | 894 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma12g01741 | 894 | MobiDBLite | consensus disorder prediction | 856 | 894 | - | - | |
Gma12g01741 | 894 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 810 | 862 | IPR004827 | GO:0003700|GO:0006355 | |
Gma12g01741 | 894 | SUPERFAMILY | alpha/beta-Hydrolases | 36 | 221 | IPR029058 | - | |
Gma12g01741 | 894 | Pfam | bZIP transcription factor | 812 | 862 | IPR004827 | GO:0003700|GO:0006355 | |
Gma12g01741 | 894 | Coils | Coil | 831 | 869 | - | - | |
Gma12g01741 | 894 | PANTHER | HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED | 251 | 864 | - | - | |
Gma12g01741 | 894 | SUPERFAMILY | alpha/beta-Hydrolases | 293 | 472 | IPR029058 | - | |
Gma12g01741 | 894 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 815 | 830 | IPR004827 | GO:0003700|GO:0006355 | |
Gma12g01741 | 894 | SMART | brlzneu | 808 | 872 | IPR004827 | GO:0003700|GO:0006355 | |
Gma12g01741 | 894 | Gene3D | alpha/beta hydrolase | 35 | 263 | IPR029058 | - | |
Gma12g01741 | 894 | PANTHER | ALPHA/BETA HYDROLASE FAMILY PROTEIN | 29 | 244 | - | - | |
Gma12g01741 | 894 | Pfam | Serine aminopeptidase, S33 | 321 | 459 | IPR022742 | - | |
Gma12g01741 | 894 | Pfam | Serine aminopeptidase, S33 | 61 | 196 | IPR022742 | - | |
Gma12g01741 | 894 | PANTHER | ALPHA/BETA HYDROLASE FAMILY PROTEIN | 251 | 864 | - | - | |
Gma12g01741 | 894 | MobiDBLite | consensus disorder prediction | 856 | 886 | - | - | |
Gma12g01741 | 894 | SUPERFAMILY | Leucine zipper domain | 812 | 861 | IPR046347 | GO:0003700|GO:0006355 | |
Gma12g01741 | 894 | PANTHER | HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED | 29 | 244 | - | - | |
Gma12g01741 | 894 | Gene3D | - | 810 | 865 | - | - | |
Gma12g01741 | 894 | Gene3D | alpha/beta hydrolase | 296 | 534 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma12g01741 | Gma-Chr12 | 37995503 | 38006410 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma12g01741 | 558 | 894 | bZIP Transcription Factor Family | AT3G44460 | 42.655 | 1.43e-59 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gma12g01741 | Hydrolase_4 | 7.5e-10 | CL0028 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma12g01741 | - | K14432 | gmx:100820370 | 618.616 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma12g01741 | 12 | 37995503 | 38006410 | Gma12g01741 | 12 | 37995503 | 38006410 | ECH | |
Gma12g01741 | 12 | 37995503 | 38006410 | Gma03g01790 | 03 | 44015499 | 44021024 | ECH | |
Gma13g02810 | 13 | 42646752 | 42648158 | Gma12g01741 | 12 | 37995503 | 38006410 | GST |