Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01727 ATGAAGGTCGTAGCTGCATACTTGCTCGCAGTGTTGGGAGGGAATCCTTCCCCTTCTGCCGATGACATCAAACACATCCTCGGCGCAGTTGGAGCTGAGGCTGAGAATGAGTTGATTGAGTTGCTCTTGACTGAAGTCAAGGGAAAAGACTTCAATGAGCTAATTGCTAGTGGAAGTGAAAAGATGTCTGCAGTGTCTGGTGGCGGTGCAGCGGTTGCCGTTGCTGCTGCACCAGCTGgaggtgctgctgcacctgctgccgaagcaaaggaagaaaagaaagtagaagagaaggaggagtctgatgatGATATGGGTTTCAGTTTGTTCGACTAA 336 0.3958 MKVVAAYLLAVLGGNPSPSADDIKHILGAVGAEAENELIELLLTEVKGKDFNELIASGSEKMSAVSGGGAAVAVAAAPAGGAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01727 111 CDD Ribosomal_P2 1 111 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma12g01727 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 111 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma12g01727 111 MobiDBLite consensus disorder prediction 87 101 - -
Gma12g01727 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 111 - -
Gma12g01727 111 MobiDBLite consensus disorder prediction 82 111 - -
Gma12g01727 111 Pfam 60s Acidic ribosomal protein 17 110 - -
Gma12g01727 111 Hamap 50S ribosomal protein L12 [rpl12]. 2 111 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma12g01727 111 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01727 Gma-Chr12 37823474 37825198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01727 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.964 1.20e-29 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02824 13 42764887 42766461 Gma12g01727 12 37823474 37825198 GST