Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01725 ATGGACCCATGGCTCGACGATCTAACCTACGACCTCCAGAGTCTTAGCTTCGCCTCCACCGCCACCGCGGACATCAAGCGGAGCACCAGCTTCGGCTCCGAAACCACCACTCTCACCGCCTCCTCCTCCGCCCACCTCCCCGCCAACAGCAAGCCCCACGCTCCCTCCTCCGACCCACGCTGGGCCGCCATCCACCGGATCCGATCGGAGTCCCCCagccgccgcatcctcccctccgacctccgcttctcccgccgtctcggctccggcgacatcagctccgtctacctcgccgaactcaacgacgggtccctctccgtgatgttcgccgccaaggtgatggACAAGAAGGAGCTGGCCAGCCGCAGCAAGGAAGGAAGAGCCAAGACCGAGAGGGAAATCCTCGAATCCCTCGACCACCCCTTCCTCCCCACCCTCTACGCCACCATCGACGCCGCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACATCCTCCGCCAACGCCAGCCCCACAAACGCTTCCCTGAACCCGCCGTCAGGTTCTATGCGTCAgaggtgctagtggcacttgaatacctccacatgatggggatagtgtaccgtgatctgaagccggagaacgtgttagttcgatcagacggccacatcATGCTCACTGATTTTGACCTCTCGTTAAAATGTGATGATTCCACATCAACGCCCCAGATCATCTTGGATCAGAAAAACACCCCACACAAGGACCCCCACGTGGATCCCTCGCAGTCTCAGTTCACCTCGTCTTCCTGCATACTACCCAGCTGTATAGTCCCCGCCGTGTCGTGTTTCCACCCAAAACGCAAGCGCAAGAAGAAGCAGGCCCAACATAATGGGCCTGAGTTTGTGGCCGAGCCCATTGATGTTCGCTCCATGTCCTTCGTTGGGACCCACGAGTACCTGGCTCCGGAAATCGTGTCCGGGGAGGGCCACGGTAGTGCCGTGGACTGGTGGACTTTGGGCATATTCATATTTGAATTGTTCTATGGTGTCACGCCCTTTAGGGGAATGGACAACGAGCTAACCCTAGCAAACATTGTGGCTCGAGCCTTGGAGTTCCCTAAGGAACCCTCCGTGCCACCCACGGCAAAGGACCTCATCTCTCAGCTATTGGTTAAGGACCCTTCGAGGAGGCTAGGCTCAACAATGGGTGCTTCCTCTATCAAGCACCACCCCTTTTTCCAAGGTGTTAATTGGGCATTGCTAAGGTGTACTCCTCCACCCTTTGTGCCCCCACATTATATTAAAGAAGCTGTATCATCTCATCATGAAATTGAAACTTGTCCGCAGACTCCCATTGATTATTATTGA 1362 0.4714 MDPWLDDLTYDLQSLSFASTATADIKRSTSFGSETTTLTASSSAHLPANSKPHAPSSDPRWAAIHRIRSESPSRRILPSDLRFSRRLGSGDISSVYLAELNDGSLSVMFAAKVMDKKELASRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHILRQRQPHKRFPEPAVRFYASEVLVALEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIILDQKNTPHKDPHVDPSQSQFTSSSCILPSCIVPAVSCFHPKRKRKKKQAQHNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPSVPPTAKDLISQLLVKDPSRRLGSTMGASSIKHHPFFQGVNWALLRCTPPPFVPPHYIKEAVSSHHEIETCPQTPIDYY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01725 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gma12g01725 453 Gene3D Transferase(Phosphotransferase) domain 1 307 429 - -
Gma12g01725 453 PANTHER OS11G0150700 PROTEIN 1 453 - -
Gma12g01725 453 SMART serkin_6 81 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01725 453 ProSiteProfiles Protein kinase domain profile. 81 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01725 453 SUPERFAMILY Protein kinase-like (PK-like) 56 438 IPR011009 -
Gma12g01725 453 Pfam Protein kinase domain 308 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01725 453 Pfam Protein kinase domain 84 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01725 453 Gene3D Phosphorylase Kinase; domain 1 80 166 - -
Gma12g01725 453 CDD STKc_phototropin_like 79 429 - -
Gma12g01725 453 PANTHER FLIPPASE KINASE 1-RELATED 1 453 - -
Gma12g01725 453 MobiDBLite consensus disorder prediction 40 60 - -
Gma12g01725 453 Gene3D Transferase(Phosphotransferase) domain 1 167 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01725 Gma-Chr12 37808962 37812602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01725 1 453 AGC Kinase Gene Family AT3G44610 67.019 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma12g01725 Pkinase 2.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01725 K08286 - gmx:100801347 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01725 12 37808962 37812602 Gma12g01725 12 37808962 37812602 ECH
Gma13g02826 13 42777314 42781150 Gma12g01725 12 37808962 37812602 ECH