Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01723 ATGGATGTTAAAATGAACAAAGTAGAGAGTGAATCTCCTTATTATAATTATTCCTCTTCATCATCATCATCCACTTCTTCTCAAAGCCAGCTCTCATTGGCATTTGCATGCAATCCGAATTTTTCACCGGACCATTCATCACTGCATGCCGAAACTTGGAAGGCAGGAGTGTTGATCTCTCACAAGAGGAAAGCGGGGAGAAAGAAGTTTCGGGAGACGCGTCACCCGGTGTACAGAGGGGTTCGGCAGAGGAACGGTAACAGGTGGGTGTGTGAAGTTCGTGAACCGAACAAGAAGTCAAGGATATGGCTCGGGACATACCCTACGCCAGAAATGGCAGCTAGGGCACATGACGTGGCTGTCCTAGCACTTAAGGGCACCTCTGCACTGTTCAATTTCCCTGATTCGGTTTCTCTTCTTCCGGTTGCAAAGTCATCTTCTGCTGCTGATGTAAGAGTTGCTGCTTCAAAAGTTTCAACGATTTTTTGCCCTTCTTATTCCTCCGTAACATTATCTAGTTCTTCACCATCTAATTCCCGGGTCAAGACTAAGCCTTGTTTGGTTGATGATTTTGTTAAGACTGAGAATAACGTTGATGAGGCCAAATCAGTGTTTTTTGATGAAGAGGCGTTCTATAATATGCCACTTTTGTTAGATAGTATGGCAGAGGGTCTTCTCATTACTCCACCGTCTATGAAGAGAGCATTTGATTGGGACCAGGTTGACTGTGAAACAGATCTCACTCTCTGGACAGATTAA 759 0.4453 MDVKMNKVESESPYYNYSSSSSSSTSSQSQLSLAFACNPNFSPDHSSLHAETWKAGVLISHKRKAGRKKFRETRHPVYRGVRQRNGNRWVCEVREPNKKSRIWLGTYPTPEMAARAHDVAVLALKGTSALFNFPDSVSLLPVAKSSSAADVRVAASKVSTIFCPSYSSVTLSSSSPSNSRVKTKPCLVDDFVKTENNVDEAKSVFFDEEAFYNMPLLLDSMAEGLLITPPSMKRAFDWDQVDCETDLTLWTD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01723 252 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Gma12g01723 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 251 IPR045277 GO:0003700
Gma12g01723 252 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Gma12g01723 252 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Gma12g01723 252 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Gma12g01723 252 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 251 - -
Gma12g01723 252 SUPERFAMILY DNA-binding domain 77 136 IPR016177 GO:0003677
Gma12g01723 252 CDD AP2 78 136 IPR001471 GO:0003700|GO:0006355
Gma12g01723 252 Pfam AP2 domain 76 126 IPR001471 GO:0003700|GO:0006355
Gma12g01723 252 MobiDBLite consensus disorder prediction 1 23 - -
Gma12g01723 252 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01723 Gma-Chr12 37785258 37786016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01723 62 251 AP2-EREBP Transcription Factor Family AT4G25470 46.316 4.44e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma12g01723 AP2 1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01723 - - gmx:100816109 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01723 12 37785258 37786016 Gma12g01723 12 37785258 37786016 ECH
Gma13g02828 13 42792921 42793652 Gma12g01723 12 37785258 37786016 GST
Gma12g01723 12 37785258 37786016 Gma12g00766 12 7075988 7076380 PCT
Gma12g01723 12 37785258 37786016 Gma11g01538 11 16411367 16412077 PCT
Gma12g00766 12 7075988 7076380 Gma12g01723 12 37785258 37786016 PCT
Gma11g01538 11 16411367 16412077 Gma12g01723 12 37785258 37786016 PCT