Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01698 ATGGCGGAGGACCGTAGTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACCGAAGATTACAGGCGCGGAGGGTACCACGCGGTTCGGATTGGTGACACTTTCAAGAATGGGAGCTATGTGGTGCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTCGCTTGGGACACTCACAAATCGCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCGGCAATGGATGAAATAAAGATTCTTAAACAAATTGCTGACGGGGATCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTTTGTATGGTTTTTGAATTCCTTGGAGATAATCTTCTCACACTTATCAAATATAGTGATTATCGAGGAGTTCCCCTTCCCATGGTCAAGGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTGTAATACACACTGATTTAAAGCCTGAGAATGTCTTGCTTTTGTCTCCAATAGATCCATCTAAGGATCCTAGAAGATCAGGCATTCCACTTATCCTTCCAAACACGAAGGATAAGACTGTGACCAAGAATGGGATAACAATAGAAAATAAAAGTTTGAATGGAGATCTGACCAAGAATCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCTGCTCAAGGCTGTGCTGGGAAGGAAAATGCTGAGGAAGTTGAGGAGGATTCCAAAGCACCTGACGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAACCTGGTGAAGTTAAACCTAATAGTCCTGTGAGGAAAGATCAATCGACAAAGACTTCTGAAAATAAAGATATTCCTCAAGGAAGTCATGGTAATAGGAGGGGTAGCCGCTCTACAAGAAAGAAGTTGCTCGAAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACCTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATACTCAACTCCAGCAGATCTGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCTCTGGCGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGTGGATGCTATTCCCGAGATTTTTTCAACAGATATGGAGATTTGAGGCACATCCGTCGGTTGCGTTTCTGGCCTCTTAATAAGGTGCTGACAGAGAAGTATGATTTCAGTGAACAAGAAGCAAATAACATGACCGATTTCCTTCTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACTGCTGCTCAATGCCTTCAGCATCCTTGGTTCAGTGCAGGTCCCCAGACTCTTGAGCCCTCATTGACTGCTGTGAAGCATGATGCTATTGAAGGGGAAATATCTGAAAAAATGCAGAGGGAAAAAGCTGAGCAGGAGGCTGTGGAAGTTGGCATGGGGAATATGGCCATAGATGGAAATCCAAAGCCACTCAAAGAGTTCCAATCTATGAAGCCATCAGAATAG 1638 0.4298 MAEDRSEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGSYVVQSKLGWGHFSTVWLAWDTHKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRRSGIPLILPNTKDKTVTKNGITIENKSLNGDLTKNQKKKLRKKAKKAAQGCAGKENAEEVEEDSKAPDEQDDCSNDVKPSVEPGEVKPNSPVRKDQSTKTSENKDIPQGSHGNRRGSRSTRKKLLEAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELASGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGCYSRDFFNRYGDLRHIRRLRFWPLNKVLTEKYDFSEQEANNMTDFLLPLLDFVPEKRPTAAQCLQHPWFSAGPQTLEPSLTAVKHDAIEGEISEKMQREKAEQEAVEVGMGNMAIDGNPKPLKEFQSMKPSE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01698 545 SUPERFAMILY Protein kinase-like (PK-like) 35 491 IPR011009 -
Gma12g01698 545 CDD STKc_SRPK 29 482 - -
Gma12g01698 545 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 542 - -
Gma12g01698 545 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Gma12g01698 545 SMART serkin_6 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01698 545 MobiDBLite consensus disorder prediction 281 304 - -
Gma12g01698 545 Pfam Protein kinase domain 319 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01698 545 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01698 545 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Gma12g01698 545 MobiDBLite consensus disorder prediction 224 310 - -
Gma12g01698 545 ProSiteProfiles Protein kinase domain profile. 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01698 545 MobiDBLite consensus disorder prediction 182 201 - -
Gma12g01698 545 PANTHER SERINE KINASE-LIKE PROTEIN 8 542 - -
Gma12g01698 545 Gene3D Transferase(Phosphotransferase) domain 1 123 483 - -
Gma12g01698 545 MobiDBLite consensus disorder prediction 522 545 - -
Gma12g01698 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01698 Gma-Chr12 37482335 37485966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01698 6 533 EF-hand Containing Proteins AT5G22840 70.149 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gma12g01698 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01698 K08832 - gmx:100791829 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01698 12 37482335 37485966 Gma12g01698 12 37482335 37485966 ECH
Gma13g02853 13 43028151 43031786 Gma12g01698 12 37482335 37485966 GST
Gma12g01698 12 37482335 37485966 Gma12g00745 12 6780495 6784789 PCT
Gma12g00745 12 6780495 6784789 Gma12g01698 12 37482335 37485966 PCT