Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01692 ATGTGGCGAGAGATTGAAGATGAGCAGGTAGTGAGACAAGTTCAAGGAAGACCTGGGGAGGTACAAAGGAGTGATGGGTTGGTTGTGGACCTCTCACAGGAAAATGTGCCCAATAGCAGCAACCAGAGAGAAGAGCATATGATAGAGGATGCAGTTTTGGGTGAGAATGATTCTGAAACCTGGTCGCAAAGTCAGAATGAGTTCCATGATGAACAGGAGGAATTAAACAATTCTAGCCGTGAAACCTCCTCTGATTTTGGAGTAGTTGAAAGGGAAAGAGTGAGACAAATATTCAGGGAATGGATGAATAGTGGTTCTAGGGGTCATGCATCGAATAATTCCCAAGGAAATAATTCAAGGGGAGAATGGCTGGGGGAAACTGAGCAGGAAAGGGTGAGTGCCACAAGGGAGTGGGTACAGATGAGTAGCCATCAGAGAGGTGTTTCTTCTGGGGAAAATAGGGAAGAGCAATCTTCTGAAAATGGTACCCAAATTGAATGTGTTCGTGATGGATTTGTTGTTAATCAGAACGAGGGCCAATGCCAAACTGAGCATACACGGAGGGGAATCCGTAAATTATGGGGTCGACAGGTGTTTCTTGATATGCTTAAGAAGGCTGAGATGGAAAGACAAAGAGAAGTACAGGAACTGTTGGACCATCGAGTTGTATCTCATTTTCCCCATCGCAATCGCATTCAGGCCTTGCTTAGAGGCAGGTTCTTGAGAAATGATAGATCGATTGATAATAACAGGTCCACTTCCATTGCAGAAAGTGAATTAGGCTTATTGAGACAAAAGCAGACTGTATCAGGTCTAAGGGAAGGTTTCGTTTTTAGAAAGGACAATTTTGGTTGTAGTCATGCAACCAGTAACACATCTGATACCTCATCCGAGAACGACATTGATGTTAATACAATTGAAGACACTGGAGCTAGCAGCTCACAAGCAGTCCCAACTGTACATTCTCAACAATCTGAACCTAATAACAGGGTAAGTGATGGACTTGAGATATCAGGTGATCAGATTTGTTCAAAAGGAACCATTTGTGAGAATTTAGATTGGCAAGGCTCTACTGCTCATGTGGAAGCAAGAGATTTGGAATCATCTTTCAGTACCAGGGTTGAAAGAGGAGATGGCACTGGAGGAAATGTTGATATGATGCCAACTGAAAATCCTTCTAATGACTGTAGTCAACTAAGCTTGCAAATTGAAGATACAGAGCATGACAATATGCATGAGTTTAGTGAGGTACATACTGAGCAATCTCAGCGGGGTGATATAAATAATGATGAAAGCAATTTTTCAAATCATGATGATCGTGTATACAGCAATATTGTTGATGATGTAGATTTGATTGAATCTATTGCTCTGGAAGGGGAGCAACAGGAAGAAGTTATTATTGAAAATGACGGAAGTGACTGGCATCAAAGTGTGGATGATATTCAGCTCAGTAGCACAACAAATGAATGGCCCCAAAACATATTGGGAAGTGAAGATGGAGAAAATTCTCGTATGCAGGAGCAAGAAGTCCCTGAAGTGTGGCAAGAGGATGGTGGCTTTCAAGAGGCTGTGGAAATTTGGTTAGGAGGACCTTCTGATAATGAAGTAGCTCCAGTTGGTAGAATTCATGGATTTTATTTTCCTGAAGATGACAATGTATACAGTGTTGAACTCAGGGAATTGCTAAGTAGGAGAAGTGTCTCAAACCTCCTTCGCAGCAGTTTTCGTGAAAGTCTTGATCAATTAATACAATCATATGTTGAAAGGCAAGGTCATGCTCACGTTGAATGGGAGCTGCAAGAGACAACCCCTTCTTCTCCCTTGGCAGAACAAGTATCGGGGCAACGGAGTAGGGGTCCAATTGTTGGTCCTCAGGCTACTGTTAATAGCTCACTTAACAGACCCTTGCCACCAACGCCTCCGCCTCAGCCTTTATGGGATCGGCACTCACGTCATGACAATTGGTCCCAGAGTGACATAAATAATCAGCGCTTAGGAATTGTGCGTTCATTTGCCGGACATAACTGCTTTTCTTTAGCTGATGAGTGGGATATTGTTAATGACTTGAGAATTGACATGGTTAGGCTACAACAAAGGATGAATAATATGCAGAGAATGCTGGAGGCCTGTATGGATATGCAGCTTGAGTTGCAACGCTCAATAAGACAAGAAGTCTCTGCAGCCCTAAATCGCTCAACTGGTTCATCAGGAATACAAAACCGTGTTTCACCAGACGATAAATCTAAATGGGAATGTGTGAGGAAAGGACTTTGTTGTATATGCTGCGAAAGCAATATTAATTCTTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCCAATGATTTGCTCCAAAAATACAGGATCCTAACAAGTTCTATCTCCTGGACGTTTCCAGCGTATTGTGTGTAG 2421 0.4254 MWREIEDEQVVRQVQGRPGEVQRSDGLVVDLSQENVPNSSNQREEHMIEDAVLGENDSETWSQSQNEFHDEQEELNNSSRETSSDFGVVERERVRQIFREWMNSGSRGHASNNSQGNNSRGEWLGETEQERVSATREWVQMSSHQRGVSSGENREEQSSENGTQIECVRDGFVVNQNEGQCQTEHTRRGIRKLWGRQVFLDMLKKAEMERQREVQELLDHRVVSHFPHRNRIQALLRGRFLRNDRSIDNNRSTSIAESELGLLRQKQTVSGLREGFVFRKDNFGCSHATSNTSDTSSENDIDVNTIEDTGASSSQAVPTVHSQQSEPNNRVSDGLEISGDQICSKGTICENLDWQGSTAHVEARDLESSFSTRVERGDGTGGNVDMMPTENPSNDCSQLSLQIEDTEHDNMHEFSEVHTEQSQRGDINNDESNFSNHDDRVYSNIVDDVDLIESIALEGEQQEEVIIENDGSDWHQSVDDIQLSSTTNEWPQNILGSEDGENSRMQEQEVPEVWQEDGGFQEAVEIWLGGPSDNEVAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQGHAHVEWELQETTPSSPLAEQVSGQRSRGPIVGPQATVNSSLNRPLPPTPPPQPLWDRHSRHDNWSQSDINNQRLGIVRSFAGHNCFSLADEWDIVNDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGIQNRVSPDDKSKWECVRKGLCCICCESNINSLLYRCGHMCTCSKCANDLLQKYRILTSSISWTFPAYCV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01692 806 MobiDBLite consensus disorder prediction 104 164 - -
Gma12g01692 806 Pfam Zinc finger, C3HC4 type (RING finger) 755 788 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 134 164 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 599 654 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 28 42 - -
Gma12g01692 806 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 791 - -
Gma12g01692 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 736 802 IPR013083 -
Gma12g01692 806 MobiDBLite consensus disorder prediction 64 78 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 365 393 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 1 88 - -
Gma12g01692 806 Coils Coil 686 713 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 310 330 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 105 123 - -
Gma12g01692 806 PANTHER PROTEIN, PUTATIVE-RELATED 1 791 - -
Gma12g01692 806 MobiDBLite consensus disorder prediction 599 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01692 Gma-Chr12 37365299 37370516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01692 - - gmx:100804887 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01692 12 37365299 37370516 Gma12g01692 12 37365299 37370516 ECH
Gma13g02857 13 43083615 43089141 Gma12g01692 12 37365299 37370516 ECH
Gma13g02857 13 43083615 43089141 Gma12g01692 12 37365299 37370516 GST
Gma12g01692 12 37365299 37370516 Gma12g00734 12 6625730 6631961 PCT
Gma12g01692 12 37365299 37370516 Gma11g01573 11 16890714 16896478 PCT
Gma12g00734 12 6625730 6631961 Gma12g01692 12 37365299 37370516 PCT
Gma11g01573 11 16890714 16896478 Gma12g01692 12 37365299 37370516 PCT