Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01673 ATGGATCCGACGGAATATACAGTTCTCTCAGACCCAAAGCTCTCACTCGTTTCTCATCTTTTCAGCAAACTCTTCAGAAACACTTTCATTCGCGGAGCTCAAGTTGCGCCAGCAGAACTTGAAGGGCTTCTGGTTTCTCGCTCTGAAATACTTGATGCTGTTGTCATTCCATATCCTGATGCTGAAGTTGGCGAGGTTCCAGTTGCCTATGTCTTTCGTTCACCCAATAGTTCACTAACAGAGGAAGGCGATCAAAAATTTGCTAAGCAGGTAGCGCCTTTCAAAAGATTACTAAGAGTGACATTCATCAATGCTGTTCCTAAGACAGCATCGGGAAAATTCTTCAAAGGGAGCTTATTGAGAAATGCACAGTACTTCTTCCCTTAA 387 0.4341 MDPTEYTVLSDPKLSLVSHLFSKLFRNTFIRGAQVAPAELEGLLVSRSEILDAVVIPYPDAEVGEVPVAYVFRSPNSSLTEEGDQKFAKQVAPFKRLLRVTFINAVPKTASGKFFKGSLLRNAQYFFP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01673 128 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 120 - -
Gma12g01673 128 Pfam AMP-binding enzyme C-terminal domain 39 113 IPR025110 -
Gma12g01673 128 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 31 120 - -
Gma12g01673 128 SUPERFAMILY Acetyl-CoA synthetase-like 30 121 - -
Gma12g01673 128 Gene3D - 29 125 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01673 Gma-Chr12 37092621 37097682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01673 31 124 Monolignol Biosynthesis Gene Families AT4G05160 65.263 4.72e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01673 K01904 - gmx:100797843 140.584