Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01665 ATGGCTGAGATTGAGGGTTCTCCTGGAAGCTCCATGCATGGAGTAACAGGAAGAGAACAAACATTCGTAGCCTCAATTGCTTCTCCAATTGTCCCCACAGACACCACAGCCAAATTTGCTCTCCCAGTAGACTCAGAGCACAAGGCCAAGATTTTCAAACTCTTCTCCATGGCCAATCCCCACATGAGAACCTTCCACCTTTCTTGGATCTCCTTCTTCACCTGCTTCGTCTCGACCTTCGCAGCAGCCCCTCTTGTCCCCATCATCCGCGACAACCTTAACCTCACCAAAAGCGACATTGGAAACGCCGGGGTTGCTTCTGTCTCCGGAAGCATCTTCTCTAGGCTTGCAATGGGTGCGGTCTGTGACCTATTAGGTCCACGTTATGGCTGTGCCTTCCTCATCATGCTCTCGGCCCCAACCGTGTTCTGCATGTCCTTTGTGAAAGATGCTGCGGGGTACATAATGGTTCGGTTCTTGATAGGGTTCTCCTTGGCAACGTTCGTGTCATGCCAGTACTGGATGAGCACGATGTTCAACAGTAAGATTATAGGGCTTGCGAATGGAACTGCTGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAGCTTATCAGAAGAGCTGGGGCTACTCCCTTCACTGCTTGGAGGATAGCCTTCTTTGTACCGGGTTTCATGCATGTCATCATGGGGATCCTTGTCCTAACTCTAGGCCAGGACTTGCCTGATGGAAACCTTGCGGCCTTGCAGAAGAAGGGTGATGTAGCAAAAGACAAGTTTTCCAAGGTGCTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCCTCTATGGGTACTCAATGGGAGTTGAATTGACAACTGACAATGTCATTGCTGAGTATTTCTATGACAGGTTTAATCTGAAGCTGCACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAACTTAGTTGCTCGACCCTTTGGTGGATATGCTTCTGATGTTGCAGCCAGATTGTTTGGCATGAGGGGAAGACTCTGGACCCTTTGGATCCTCCAAACATTAGGAGGGGTTTTCTGTATTTGGCTTGGCCGAGCCAATTCTCTTCCTATTGCTATTTTGGCTATGATCCTGTTCTCTTTAGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCCTTCATCTCAAGAAGGTCATTGGGGATCATATCAGGTCTCACTGGTGCAGGTGGGAACTTTGGGTCTGGCCTCACCCAATTGGTCTTCTTTTCAACATCCAAATTCTCCACTGCCACAGGTCTCTCCTTGATGGGTGTGATGATAGTGGCTTGCACTCTTCCTGTGAGTGTTGTTCATTTTCCACAGTGGGGTAGCATGTTCCTACCACCATCAAAAGATGTCAACAAATCCACTGAAGAATTCTATTACACCTCTGAATGGAATGAGGAAGAGAGGCAGAAAGGCTTGCATCAGCAAAGTCTCAAGTTTGCTGAGAATAGCCGATCCGAGAGAGGAAagcgagtggcttcagcaccaacacctccgaatgcaactcccactcatgtctag 1593 0.4677 MAEIEGSPGSSMHGVTGREQTFVASIASPIVPTDTTAKFALPVDSEHKAKIFKLFSMANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIMVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFVPGFMHVIMGILVLTLGQDLPDGNLAALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLVARPFGGYASDVAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAILAMILFSLGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTATGLSLMGVMIVACTLPVSVVHFPQWGSMFLPPSKDVNKSTEEFYYTSEWNEEERQKGLHQQSLKFAENSRSERGKRVASAPTPPNATPTHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01665 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Gma12g01665 530 SUPERFAMILY MFS general substrate transporter 59 458 IPR036259 -
Gma12g01665 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Gma12g01665 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Gma12g01665 530 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Gma12g01665 530 CDD MFS_NRT2_like 65 456 IPR044772 GO:0015112
Gma12g01665 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Gma12g01665 530 MobiDBLite consensus disorder prediction 490 513 - -
Gma12g01665 530 MobiDBLite consensus disorder prediction 490 530 - -
Gma12g01665 530 Gene3D MFS general substrate transporter like domains 264 465 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01665 Gma-Chr12 36990221 36992774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01665 1 530 Inorganic Solute Cotransporters AT5G60770 80.377 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01665 K02575 - gmx:100782969 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01665 12 36990221 36992774 Gma12g01665 12 36990221 36992774 ECH
Gma13g02881 13 43344022 43346761 Gma12g01665 12 36990221 36992774 GST
Gma12g01665 12 36990221 36992774 Gma12g00702 12 6259454 6259876 PCT
Gma12g01665 12 36990221 36992774 Gma11g01605 11 17270857 17274133 PCT
Gma12g00702 12 6259454 6259876 Gma12g01665 12 36990221 36992774 PCT
Gma11g01605 11 17270857 17274133 Gma12g01665 12 36990221 36992774 PCT