Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01663 atgcttccTCCTTTTACTATGTGCAAGACAAAGATGGCAACCAACGCGGCCAGTCCCACTCGCTCCCAACAACAAGCCACCCAAAGCCCAAGAACACCCTCGTCAAGGCCCAGTCCCAGGCCCACCTCTTTCTCCGACAACCCCTCCACCTCCTACAGCAGCAACAGCGCACCCTACAGCGGCTCCACCGGCTATCGCCTCTCCTCCGACACCACCATCTCAAGCTTCTCCTCCCTCACCTCCCTCCGTGACACTCTCCCCGAAAACCCTCACATCTATGACTTCTCCGAAATCTGTGCCGCCACCAACAACTTCCTCGCCAAACGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACCCTCCGCGGCGCCGATGTCATTGTCTTCCAGCGCAAGTTCCGCCGCAAGCTCCAAACTCCACAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAGCTCCTCGGCGCCTCCGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCAACAACGGCGCCACCCTCTCCGACTGCCTCCGCAACAAAAACAACGTGCACTTCACCGTCCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACAGATCTCGCTCACGGCCTCGATTACATTCACAACAAGACCGGTTTGAACATCAATTTCGTCCATAACCATATCAAGAGCAGCAGCATCATCGTCACCGAGCCTTCCTTCAACGCTAGGGTTTGCCACTTCGGCGCCGCGCAGCTCTGCGGCGAAATCGAACTCGATAACCAGAAATTAGGCGAAATTAGTGAAATCGAGGAGAAATTAACATCGTCGCCGGCGAGATCCAAGCAGTTCGAGGGAGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTGGCGACTCAGAAGTCTGATATATACGCTTTTGGAGTGGTGATGTTGGAGCTTTTGTCCGGGGAGGAGCCGTTGAAGTTCAAGTTCGACGAGAAGACGCGCACATTCGTGAGGACGTCGGTGATTGATGCGGCGAGGGCCGCCGTGGTCGACGGCGAAGGTAGCGTGGAGGGGAAGCTGAGGAGGTGGGTGGATCGGAGATTGAAAGATTCTTTTCCTGTTGATGTAGCTGAAAAATGGACACGTGTCGCGCTGGAGTGTGTACACGTGGATCCAGATAAGAGACCGAACATGGGACGCGTCGCTGGCAAGATCTCCAAGTTTTATTTGACGTCGAGGATCTGGTCAGATAGTATTAAGATGCCTGATATGACTGTTTCGTTGGGACCTCGATGA 1305 0.5586 MLPPFTMCKTKMATNAASPTRSQQQATQSPRTPSSRPSPRPTSFSDNPSTSYSSNSAPYSGSTGYRLSSDTTISSFSSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRKLQTPQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNNGATLSDCLRNKNNVHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSSIIVTEPSFNARVCHFGAAQLCGEIELDNQKLGEISEIEEKLTSSPARSKQFEGVRGYMAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTRTFVRTSVIDAARAAVVDGEGSVEGKLRRWVDRRLKDSFPVDVAEKWTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDMTVSLGPR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01663 434 ProSiteProfiles Protein kinase domain profile. 65 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01663 434 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Gma12g01663 434 SUPERFAMILY Protein kinase-like (PK-like) 89 404 IPR011009 -
Gma12g01663 434 MobiDBLite consensus disorder prediction 1 63 - -
Gma12g01663 434 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01663 434 MobiDBLite consensus disorder prediction 11 63 - -
Gma12g01663 434 PANTHER OS09G0572100 PROTEIN 7 434 - -
Gma12g01663 434 Gene3D Transferase(Phosphotransferase) domain 1 179 420 - -
Gma12g01663 434 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01663 Gma-Chr12 36905080 36906623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01663 88 422 Receptor kinase-like Gene Family AT1G51940 31.858 1.11e-41 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma12g01663 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01663 - - gmx:100792694 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01663 12 36905080 36906623 Gma12g01663 12 36905080 36906623 ECH
Gma13g02882 13 43388671 43390220 Gma12g01663 12 36905080 36906623 ECH
Gma13g02882 13 43388671 43390220 Gma12g01663 12 36905080 36906623 GST