Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01659 ATGATGCCAACAACAAATTCAAACACCCCAACAGCACATGCAAAGACGGTATCTAAAATGACGATGACGCCTGTGACGGAACCATCCCTTGCTATGTCTGCTATTATGGTTGTTGTTCTTGCTGAGGCTATGGTTGAGGTTGAACATGAGGCAGTGACGGTGGCGGTGGTGATGGTGATGGCAATGGCGCTGGCGATGGGGAAGATAGCAAGAAAGTTGAAGGAAGACTTGAGTTCAGCCTCCTTTGTTGACACTAGGGACTCACTACTGCAGAGGATATTATCCTGTTATGGCAATGCTTTACTTCTTCTAAGATGGAATGAATCAATGTCCACGCAACAACCAACTAGAACTTCCTCACCATTGAGGGAAGGCGCTCAAGATCATCAGCAACTTAAACATAATTCAAAGAAAAGAAAGATGATGCCAAAATGGACGAAACATATTAGAGTGAAGATCGAGAACGACGTTGAAGGGCCCCTCGAAGATGGTTACAACTGGAGAAAATATGGACAAAAAGACATCCTTAGTGCAAAATATCCCAGGGGGGGTGAGGTTTCTTTGTTGGTGGGTTTCGTGCATTTCATGTCGTGTGGAATAAGTGTCAACAATGTCCAAGAGGGCGAAATAGGTAGTGGTAATGGCTTTGGATTTAAATTGGCACTGTATGAAGTCAGTGTACCTATGTCACCATTGAAAAGCTTGAGGAGACATTCCTGA 720 0.4417 MMPTTNSNTPTAHAKTVSKMTMTPVTEPSLAMSAIMVVVLAEAMVEVEHEAVTVAVVMVMAMALAMGKIARKLKEDLSSASFVDTRDSLLQRILSCYGNALLLLRWNESMSTQQPTRTSSPLREGAQDHQQLKHNSKKRKMMPKWTKHIRVKIENDVEGPLEDGYNWRKYGQKDILSAKYPRGGEVSLLVGFVHFMSCGISVNNVQEGEIGSGNGFGFKLALYEVSVPMSPLKSLRRHS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01659 239 ProSiteProfiles WRKY domain profile. 156 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01659 239 Gene3D WRKY domain 147 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01659 239 Pfam WRKY DNA -binding domain 162 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01659 239 MobiDBLite consensus disorder prediction 113 140 - -
Gma12g01659 239 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 68 182 IPR044810 GO:0003700
Gma12g01659 239 SUPERFAMILY WRKY DNA-binding domain 160 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01659 239 SMART WRKY_cls 161 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01659 239 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 68 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01659 Gma-Chr12 36823654 36827279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01659 130 182 WRKY Transcription Factor Family AT4G23810 58.491 6.06e-17 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma12g01659 WRKY 2.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01659 - - gmx:100127370 186.422