Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01651 ATGGCTTTTGGTAATTCAAGATCTGCAAGGTTTGAAGATGATCCGGAGCTAGCAAAATTTCCTGTTACTAACGGTGACAATGGTGCTAAGATTAAATTCCACATTGATGGCACACAAATACCTGAGCCTAGTTCCAATATGGCTCCGAAAAAGGTGGCAGGGAAGTTCTTGAAAACTAGAATGCTGTCAAGAGTGTTCTCAGAAGACTATGGCAGAGTAAAACGAATAGTGTTAGATCCTAGGGGACAAACCATTCACCGATGGAACAAGATTTTCTTGGTAGCATGTTTAGTATCTTTGTTTGTGGACCCTTTGTTCTTTTATCTTCCAGTGGTTCGAGATGAAGTGTGCATTGATATTGGAATAACTCTTGAAGTTATCCTCACATTGGTAAGATCAGTGGTGGATGTCTTTTATGTGATTCAGATTTTGATGAAGTTTCGGACGGCTTTTGTTGCTCCTTCTTCAAGGGTTTTTGGGAGAGGAGAACTTGTTTTAGGGTATTATAAGATTGCATTTAGGTACCTCCGCAAGGGTTTCTGGTTAGACTTTGTTGCTGCCCTGCCCCTTCCTCAGGTGTTAATTTGGATTGTTATCCCAACTCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATATTCCGAGGCTACTTTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTGACAGAGACGGCATGGGCAGGGGCTGCTTACAACCTTATGCTTTACATGCTGGCTAGCCATATTTTAGGGGCTTGCTGGTACCTTCTATCAATCGAACGTCAAGAAGCATGCTGGAGAAGTGTATGTGATTTGGAGAAGTCATTTTGTCAATATGGATTCTTTGACTGCCACAGGGTTAAAGGTGCCCTCAGGGTCTCCTGGTTTATGGCAAGTAATATCACAAATTTATGCTCACCAAATGCAAACCATGACTTCTATCAGTTTGGTATATACGCTGATGCCGTGACTTCCAAAGTTACATCCTCGGCATTCTTCAATAAGTACTTCTTTTGCCTGTGGTGGGGCCTAAGGAATTTGAGTTCTTTGGGTCAAGGCCTTCTTACTAGCACATATGTTGGAGAAATAATGGTCGCCATTGTTGTTGCAACCCTCGGATTGGTTCTTTTTGCATTGCTGATTGGTAATATGCAGACATATCTCCAATCAACTACTGTTCGCTTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAGCAATGGATGCATCACAGGCAACTACCTCCAGAGCTAAGAGAATCTGTGCGTAAATATGACCAATACAAATGGCTGGCTACACGAGGAGTAGATGAAGAAGCTCTTCTCAAAGGACTTCCCGTGGATCTTCGTAGAGACATCAAGCGCCACCTCTGTCTCGATCTAGTTCGAGGAGTGCCATTATTTGATCAAATGGACGAGAGAATGCTGGATGCAATATGCGAGAGGCTAAAGCCTGCATTGTGCACTGAGGGCATGTTTCTGGTCCGCGAGGGTGATCCTGTGAACGAGATGCTATTCATAATCCGAGGCCATCTAGATTCTTACACCACCAACGGGGGCCGGGCCGGGTTCTTCAACTCGTGCTGCATTGGGCCTGGCGATTTCTGCGGGGAGGAGCTTCTAACATGGGCCTTGGACCCACGGCCCAGTGTGATACTCCCCTCATCCACTCGAACAGTGAAAGCCATCTCAGAAGTGGAGGCCTTTGCACTCATAGCAGAAGACCTCAAGTTCGTTGCGTCACAGTTTAGAAGACTACACAGCAAACAGCTCAGGCATAAGTTCAGGTTTTACTCGCACCAGTGGAGAACTTGGGCCGCGTGTTTCATTCAAGCTGCTTGGAGAAGGCACAAGAAAAGAAAGGAAGTGGCTGAACTAATTAGGGCAAGGGCAATTCATGTTAATGTTGTTGATGAGCCTCAAACTCAAACACCAACCTATGCTAAAAGGGTTGCCAGGAGTACTAGGACAGATTCTGGAGTTGTAAGCTCCTTGCAGAAGCCAGCAGAACCTGATTTCTCTGTTGTTGAATAG 2079 0.4459 MAFGNSRSARFEDDPELAKFPVTNGDNGAKIKFHIDGTQIPEPSSNMAPKKVAGKFLKTRMLSRVFSEDYGRVKRIVLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGITLEVILTLVRSVVDVFYVIQILMKFRTAFVAPSSRVFGRGELVLGYYKIAFRYLRKGFWLDFVAALPLPQVLIWIVIPTLRGSTMANTKNVLRFFIIFQYIPRLLLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRSVCDLEKSFCQYGFFDCHRVKGALRVSWFMASNITNLCSPNANHDFYQFGIYADAVTSKVTSSAFFNKYFFCLWWGLRNLSSLGQGLLTSTYVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRESVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGMFLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCCIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEVAELIRARAIHVNVVDEPQTQTPTYAKRVARSTRTDSGVVSSLQKPAEPDFSVVE 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01651 692 MobiDBLite consensus disorder prediction 660 679 - -
Gma12g01651 692 ProSiteProfiles IQ motif profile. 618 646 IPR000048 GO:0005515
Gma12g01651 692 SUPERFAMILY cAMP-binding domain-like 412 608 IPR018490 -
Gma12g01651 692 SMART cnmp_10 482 613 IPR000595 -
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 132 142 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 143 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 260 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 351 368 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 395 404 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 PRINTS EAG/ELK/ERG potassium channel family signature 445 452 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma12g01651 692 Pfam Ion transport protein 88 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma12g01651 692 Gene3D - 90 406 - -
Gma12g01651 692 CDD CAP_ED 482 613 IPR000595 -
Gma12g01651 692 Gene3D Helix hairpin bin 409 473 - -
Gma12g01651 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 49 689 - -
Gma12g01651 692 SUPERFAMILY Voltage-gated potassium channels 79 404 - -
Gma12g01651 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED 49 689 - -
Gma12g01651 692 Gene3D Jelly Rolls 480 600 IPR014710 -
Gma12g01651 692 MobiDBLite consensus disorder prediction 660 692 - -
Gma12g01651 692 ProSiteProfiles cAMP/cGMP binding motif profile. 482 579 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01651 Gma-Chr12 36692363 36696317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01651 54 689 Ion Channels AT2G28260 77.116 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01651 K05391 - gmx:100786868 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01651 12 36692363 36696317 Gma12g01651 12 36692363 36696317 ECH
Gma13g02890 13 43477782 43481491 Gma12g01651 12 36692363 36696317 GST
Gma12g01651 12 36692363 36696317 Gma12g00681 12 6000894 6006235 PCT
Gma12g00681 12 6000894 6006235 Gma12g01651 12 36692363 36696317 PCT