Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01624 ATGTCTCCCCCATCGGAGACCATCGCCACTCGGGTTCCTCCTATGTTGTCGCCGGTGGAGGATGCCACCTACGTTCAACCCAACCTCCAAGATCAATTGTTAGCGTTACAGAACATCAATAGCGGGAACAACACTTATGATCACCCGCAGACACAGTTTGTTAATAGCGCAACGAACCAGGTTGCTCCCATGTGGCCAGGCTCCCAAATCAATCACTCGCTGTCACGGAAGGGCAGTTCTTCGAAGTCCAATGAgtgcaggagatggagtgaagaagaacacaggttgtttctgcatgagcttcagaaatatggaaagggagattggataaacatttcaagaatcatcaaaacaagaaacccaactcaaACTCGATTTGCACGGGTGAAGTTACATATTTTTAGTCCACCTATACAACACAATACTGAAAGATCAAAGTTCAAGGGAAAATCAATTAGTCTGAATATGAAAATCAAAGACAAGGAAGTGTATGCAGCAGAAATCTCTACTGCTTTCAACCTTGATGATTTTCCTTGA 537 0.3557 MSPPSETIATRVPPMLSPVEDATYVQPNLQDQLLALQNINSGNNTYDHPQTQFVNSATNQVAPMWPGSQINHSLSRKGSSSKSNECRRWSEEEHRLFLHELQKYGKGDWINISRIIKTRNPTQTRFARVKLHIFSPPIQHNTERSKFKGKSISLNMKIKDKEVYAAEISTAFNLDDFP 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01624 178 SUPERFAMILY Homeodomain-like 86 125 IPR009057 -
Gma12g01624 178 ProSiteProfiles Myb-like domain profile. 88 125 IPR001005 -
Gma12g01624 178 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 123 IPR017930 -
Gma12g01624 178 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 124 - -
Gma12g01624 178 Gene3D - 88 130 - -
Gma12g01624 178 CDD SANT 88 125 IPR001005 -
Gma12g01624 178 MobiDBLite consensus disorder prediction 66 86 - -
Gma12g01624 178 MobiDBLite consensus disorder prediction 66 80 - -
Gma12g01624 178 Pfam Myb-like DNA-binding domain 88 123 IPR001005 -
Gma12g01624 178 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 124 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01624 Gma-Chr12 36285180 36286881 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma12g01624 Myb_DNA-binding 8.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01624 - - gmx:121173128 252.677