Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01618 ATGGAGGGAGATCAACATGGCTCTAATTACTCTTTTCCACCTGGCTTTAGATTCCACCCTTCCGATGAAGAACTCATAGTTCATTACTTGGAAAACAAAGTCAGTTCACGTCCACTTCCAGCTTGCATTATTGCTGAAATTGATCTCTATAAGTATAACCCGTGGGAGCTACCGAATAAGTCCTTGTTTGGAGAGGAAGAATGGTATTTCTTTAGCCCGAGAGACAGGAAGTACCCGAATGGATTGAGGCCAAACAGGGCTGCAGCCTCAGGATACTGGAAGGCAACTGGAACTGACAAGCCAATTCTTTCTTCTTGCGGATCGAGGCGCATAGGTGTGAAGAAAGCTCTGGTGTTTTATTCAGGTCGACCTCCTAAGGGTGCTAAGACAGATTGGATCATGAATGAGTATAGGTTGGTTGACACAACCATCAAATCCTCAAGGCTAAAAGGCTCCATGAGATTGGATGACTGGGTACTATGCCGGGTTCGATATAAAGGCTACTCTCAGAAGAATTCATGTGAAAATCAAGAGAGTCCTAGTGAACTAAACTTGTCAGCAAAACTACTGAGGAGTGAAGAAAACCCAACAAAAATGAACTGTCGGGCTGACATGATCCCTGATTATCAATATAAAGACTATCAAATCATAGCCTCTATTCTTGTTGGTGGACCTATTCCTCCCATTGAAAGCATGCCAAATCTGAGCTTTAAGGGTTGCAAAGGCAACAATGTAGTTTCAGATTATGAAGATGGTTTCACTAAAGGGAATTCTCAAACGACAATTCCTTCATTGGAAAGTTACTTCAACCCACTGACAAGAAAATCCAATGAAGATGAACAGTATGGAAATCTCATTTCTTTCAACAGGAAGTTCAACACTGATAACAGAATGGACGGATCTACTAGCAAAGTGTTGAACAGTAGAGAATTGAATTGCTACAACCAAAACCATTCTCAAGATGACATTTTCAATGGGAACCCACCAGATCCTACCATCAATTTTCAAGAGCTAAACGAATTAGACTTTTCAGGAAGGTACCATCAGTGA 1050 0.4143 MEGDQHGSNYSFPPGFRFHPSDEELIVHYLENKVSSRPLPACIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSCGSRRIGVKKALVFYSGRPPKGAKTDWIMNEYRLVDTTIKSSRLKGSMRLDDWVLCRVRYKGYSQKNSCENQESPSELNLSAKLLRSEENPTKMNCRADMIPDYQYKDYQIIASILVGGPIPPIESMPNLSFKGCKGNNVVSDYEDGFTKGNSQTTIPSLESYFNPLTRKSNEDEQYGNLISFNRKFNTDNRMDGSTSKVLNSRELNCYNQNHSQDDIFNGNPPDPTINFQELNELDFSGRYHQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01618 349 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 319 - -
Gma12g01618 349 Gene3D NAC domain 21 170 IPR036093 GO:0003677|GO:0006355
Gma12g01618 349 PANTHER NAC TRANSCRIPTION FACTOR 56 1 319 - -
Gma12g01618 349 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Gma12g01618 349 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Gma12g01618 349 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01618 Gma-Chr12 36180159 36182077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01618 12 175 NAC Transcription Factor Family AT1G61110 66.860 5.29e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma12g01618 NAM 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01618 - - gmx:100777776 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01618 12 36180159 36182077 Gma12g01618 12 36180159 36182077 ECH
Gma13g02918 13 43749072 43750829 Gma12g01618 12 36180159 36182077 GST